1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtactccgcgcggccgcctcttgctgccacttccctgcctgcttccctcctccgttggtcgcctcgtgattttaatcactgtctagtgagcctgctgctggtttcctgcagGATCGCGTGGCCCTTGCGTCGTCCCTCTCGGCGGTGGCGCGGTCTGCTGGCCCCGCCGTGGCAGCGGCGCAGACCAAGCCCAGCG
species | Zea mays |
transcript | GRMZM2G306374_T01 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CGGCGCCTCTCCGCCGGTGCCACAGCTTGGCCCCGGCGCCGCGCCACACG GATCGCGTGGCCCTTGCGTCGTCCCTCTCGGCGGTGGCGCGGTCTGCTGGCEST: gi|211026757|gb|FL253992.1|FL253992
genomic: CGGCGCCTCTCCGCCGGTGCCACAGCTTGGCCCCGGCGCCGCGCCACACGgtactccgcg ... tttcctgcagGATCGCGTGGCCCTTGCGTCGTCCCTCTCGGCGGTGGCGCGGTCTGCTGGC
EST: GGCGCCTCTMMMGCCGGTGCCACAGCTTGGCCCCGGCGCCGCGCCACACG GATCGCGTGGCCCTTGCGTCGTCCCTCTCGGCGGTGGCGCGGTCTGCTGGCEST: gi|148936089|gb|EC880151.2|EC880151
genomic: GGCGCCTCT-CCGCCGGTGCCACAGCTTGGCCCCGGCGCCGCGCCACACGgtactccgcg ... tttcctgcagGATCGCGTGGCCCTTGCGTCGTCCCTCTCGGCGGTGGCGCGGTCTGCTGGC
EST: CGGCGCCTCTCCGCCGGTGCCACAGCTTGGCCCCGGCGCCGCGCCACACG GATCGCGTGGCCCTTGCGTCGTCCCTCTCGGCGGTGGCGCGGTCTGCTGGC
genomic: CGGCGCCTCTCCGCCGGTGCCACAGCTTGGCCCCGGCGCCGCGCCACACGgtactccgcg ... tttcctgcagGATCGCGTGGCCCTTGCGTCGTCCCTCTCGGCGGTGGCGCGGTCTGCTGGC
ggtcgcctcgtgattttaatcactgtctagtgagcctgctgctggtttcctgcagGATCGCGTGGCCCTTGCGTCGTCCCTCTCGGCGGTGGCGCGGTCTGCTGGCCCCGCCGTGGCAGCGGCGCAGACCAAGCCCAGCG
ttttaat putative branch site (score: 35)
tttcctgc putative PPT
tgattttaat TA-rich tract