1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtcgcctcacggcccctgacctctatacgtcccttgctctgaccttctgcaatttctgacaaaatttgacaaaattctgcactccatttctcattttttcatcggtaaatgaattgatatattatatttttgcagGTCCTTGCTCTGATTATCTCTCCCACGAGAGAATTGTCCTCGCAAATATTCAATGTGGCCCAGCCCTTCTTCGCGACCCTGAATGGCGTGTCGTCCATGC
species | Zea mays |
transcript | GRMZM2G303752_T03 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CCGTCGTTGAGATCCTCCGCCGCCGCTCCTCCCCGCCCAAGTCACACGAG GTCCTTGCTCTGATTATCTCTCCCACGAGAGAATTGTCCTCGCAAATATTCEST: gi|148986421|gb|EE030162.2|EE030162
genomic: CCGTCGTTGAGATCCTCCGCCGCCGCTCCTCCCCGCCCAAGTCACACGAGgtcgcctcac ... atttttgcagGTCCTTGCTCTGATTATCTCTCCCACGAGAGAATTGTCCTCGCAAATATTC
EST: CCGTCGTTGAGATCCTCCGCCGCCGCTCCTCCCCGCCCAAGTCACACGAG GTCCTTGCTCTGATTATCTCTCCCACGAGAGAATTGTCCTCGCAAATATTCEST: gi|32801966|gb|CD954202.1|CD954202
genomic: CCGTCGTTGAGATCCTCCGCCGCCGCTCCTCCCCGCCCAAGTCACACGAGgtcgcctcac ... atttttgcagGTCCTTGCTCTGATTATCTCTCCCACGAGAGAATTGTCCTCGCAAATATTC
EST: GATCCTCCGCCGCCGCTCCTCNCCGCNCAAGTCACACGAG GTCCTTGCTCTGATTATCTCTCCCACGAGAGAATTGTCCTCGCAAATATTCEST: gi|148963948|gb|EE015072.2|EE015072
genomic: GATCCTCCGCCGCCGCTCCTCCCCGCCCAAGTCACACGAGgtcgcctcac ... atttttgcagGTCCTTGCTCTGATTATCTCTCCCACGAGAGAATTGTCCTCGCAAATATTC
EST: CCGTCGTTGAGATCCTCCGCCGCCGCTCCTCCCCGCCCAAGTCACACGAG GTCCTTGCTCTGATTATCTCTCCCACGAGAGAATTGTCCTCGCAAATATTC
genomic: CCGTCGTTGAGATCCTCCGCCGCCGCTCCTCCCCGCCCAAGTCACACGAGgtcgcctcac ... atttttgcagGTCCTTGCTCTGATTATCTCTCCCACGAGAGAATTGTCCTCGCAAATATTC
actccatttctcattttttcatcggtaaatgaattgatatattatatttttgcagGTCCTTGCTCTGATTATCTCTCCCACGAGAGAATTGTCCTCGCAAATATTCAATGTGGCCCAGCCCTTCTTCGCGACCCTGAATGGCGTGTCGTCCATGC
aattgat putative branch site (score: 15)
tattttt putative PPT
taaatgaattgatata TA-rich tract