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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...tcggagagtccgagtgatacgcgtggggattggggagactcggatcagctccgctcctttcctcggttctgatgtcgtggttggctgttgccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAACCCTAGAGATCGGCATGG

Basic information

species Zea mays
transcript GRMZM2G181151_T02
intron # 1
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211464055|gb|FL062026.1|FL062026
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|32919410|gb|CF024222.1|CF024222
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAA-
EST: gi|211464049|gb|FL062020.1|FL062020
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|211045587|gb|FL062119.1|FL062119
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|31664290|gb|CD573015.1|CD573015
EST:     CCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: CCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|211474170|gb|FL062078.1|FL062078
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|211223693|gb|FL399500.1|FL399500
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|211279000|gb|FL407011.1|FL407011
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|211469118|gb|FL062056.1|FL062056
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|211476688|gb|FL062089.1|FL062089
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|211466586|gb|FL062037.1|FL062037
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|211131888|gb|FL371457.1|FL371457
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|211471640|gb|FL062065.1|FL062065
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|211332062|gb|FL381794.1|FL381794
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|32851420|gb|CD991101.1|CD991101
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|211124910|gb|FL425297.1|FL425297
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGCAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|33100666|gb|CF060626.1|CF060626
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|211461534|gb|FL062016.1|FL062016
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|211250194|gb|FL420138.1|FL420138
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGCAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|211045584|gb|FL062116.1|FL062116
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|211132918|gb|FL391883.1|FL391883
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|211029340|gb|FL373997.1|FL373997
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|211461533|gb|FL062015.1|FL062015
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCNACTTGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|9953932|gb|BE640515.1|BE640515
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|211172669|gb|FL375066.1|FL375066
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|211464053|gb|FL062024.1|FL062024
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|211439866|gb|FL422480.1|FL422480
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|211427007|gb|FL427232.1|FL427232
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|211034220|gb|FL370384.1|FL370384
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|211459002|gb|FL061993.1|FL061993
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|211332674|gb|FL416300.1|FL416300
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|211466587|gb|FL062038.1|FL062038
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|211466594|gb|FL062045.1|FL062045
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|211448189|gb|FL410292.1|FL410292
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
EST: gi|24462502|gb|BM660033.1|BM660033
EST:     TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAG                         GTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC
genomic: TTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAAC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 48 (upstream exon), 49 (downstream exon)
Score: 605

CCGGTGTCCTCGCCTCGCCTATCCGATCTGCCACCTCGCCGTCTCGCACGTTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAACCCTAGAGATCGGCATGG


Block sizes: 48 (upstream exon), 49 (downstream exon)
Score: 745

CCGGTGTCCTCGCCTCGCCTATCCGATCTGCCACCTCGCCGTCTCGCACGTTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAACCCTAGAGATCGGCATGG


Block sizes: 48 (upstream exon), 48 (downstream exon)
Score: 368

CCGGTGTCCTCGCCTCGCCTATCCGATCTGCCACCTCGCCGTCTCGCACGTTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAACCCTAGAGATCGGCATGG


Block sizes: 48 (upstream exon), 49 (downstream exon)
Score: 658

CCGGTGTCCTCGCCTCGCCTATCCGATCTGCCACCTCGCCGTCTCGCACGTTCCTTTCCCCAACTCCCCAGCGCCTCTCCGCGCCGCGATCCAGATCCAGgtacgtcttc ... ccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAACCCTAGAGATCGGCATGG




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

cagctccgctcctttcctcggttctgatgtcgtggttggctgttgccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAACCCTAGAGATCGGCATGG
                     ttctgat  putative branch site (score: 658)
                                          ttgccct  putative PPT
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
tcggagagtccgagtgatacgcgtggggattggggagactcggatcagctccgctcctttcctcggttctgatgtcgtggttggctgttgccctgtgcagGTTGTTCAGCATGGGTCTGGTGAAGGAAGGCGTCGACATGGAGGAGGGAACCCTAGAGATCGGCATGG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGATC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gtggttg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gctgttg