1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
...gggtagtttaagaagtcccacattacattgtttgtttgttttctgaaaatcttgttccaatttactaactaatatgattttcttgtccccttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGACTTGAAATCTCTGCAGAGCGTGGGGCAAATAATTGGAGAGGTTCTCCG
species | Zea mays |
transcript | GRMZM2G171604_T01 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|108954122|gb|EC365012.1|EC365012
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CGGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGANAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|485586|gb|T18656.1|T18656
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: GTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|149076338|gb|EE164954.2|EE164954
genomic: GTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211492303|gb|FL342621.1|FL342621
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAWGCTGCTCAACTGCAGGGAGCTCGAGTNGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|21760157|gb|BQ635698.1|BQ635698
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|148999624|gb|EE036609.2|EE036609
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|149111231|gb|EE294729.2|EE294729
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211365432|gb|FL362341.1|FL362341
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211064808|gb|FL351653.1|FL351653
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|87157334|gb|DY402123.1|DY402123
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|28910242|gb|CB331341.1|CB331341
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211472283|gb|FL320091.1|FL320091
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211150843|gb|FL322002.1|FL322002
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCSCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|149081781|gb|EE170935.2|EE170935
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|26559696|gb|CA831931.1|CA831931
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|148936301|gb|EC880384.2|EC880384
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211465038|gb|FL331926.1|FL331926
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211439881|gb|FL309181.1|FL309181
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211139132|gb|FL349875.1|FL349875
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTTGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211093327|gb|FL316665.1|FL316665
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGANGCTGCTCAACTGCAGGGAGCTCGARTNGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211337754|gb|FL341964.1|FL341964
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGANGCTGCTCAACTGCAGGGAGCTCGAGTNGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|93284400|gb|EB676664.1|EB676664
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211203006|gb|FL329083.1|FL329083
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGANGCTGCTCAACTGCAGGGAGCTCGAGTNGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211342590|gb|FL343872.1|FL343872
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|149080389|gb|EE169410.2|EE169410
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211409147|gb|FL322194.1|FL322194
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|148959843|gb|EE153075.2|EE153075
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|148953590|gb|EC898944.2|EC898944
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211500957|gb|FL349225.1|FL349225
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211324258|gb|FL315472.1|FL315472
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CSGCAAGADGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|22935727|gb|BU572002.1|BU572002
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|148967099|gb|EE018270.2|EE018270
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211390789|gb|FL311859.1|FL311859
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211325283|gb|FL366955.1|FL366955
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211021609|gb|FL356213.1|FL356213
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211351952|gb|FL331043.1|FL331043
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211090841|gb|FL316182.1|FL316182
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|148942358|gb|EC887376.2|EC887376
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211540112|gb|FL312487.1|FL312487
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|20803091|gb|BQ294141.1|BQ294141
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGA-TTTACCAAGACTGAAGACGEST: gi|211280124|gb|FL354645.1|FL354645
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211440219|gb|FL323905.1|FL323905
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGANGCTGCTCAACTGCAGGGAGCTCGAGTHGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211419255|gb|FL320485.1|FL320485
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211524951|gb|FL309212.1|FL309212
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGANGCTGCTCAACTGCAGGGAGCTCGARTNGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|31358883|gb|CD443240.1|CD443240
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211369961|gb|FL325625.1|FL325625
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGANGCTGCTCAACTGCAGGGAGCTCGAGTNGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211101807|gb|FL362945.1|FL362945
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|148931017|gb|EC873580.2|EC873580
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211528496|gb|FL328398.1|FL328398
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|29543670|gb|CB604050.1|CB604050
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211286547|gb|FL312258.1|FL312258
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|67033051|gb|CO461800.1|CO461800
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|148979144|gb|EE026532.2|EE026532
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211112198|gb|FL307984.1|FL307984
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211043933|gb|FL341754.1|FL341754
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGADGCTGCTCAACTGCAGGGAGCTCGAGTNGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211520277|gb|FL356683.1|FL356683
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGADGCTGCTCAACTGCAGGGAGCTCGAGTVGCGCGTCGGCACCG TGAGAGAAAGCCTTAAMAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|148964792|gb|EC906040.2|EC906040
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211295364|gb|FL325953.1|FL325953
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|26457506|gb|CA829089.1|CA829089
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|149112655|gb|EE191390.2|EE191390
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211100591|gb|FL309393.1|FL309393
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|149100597|gb|EE186683.2|EE186683
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211130576|gb|FL330790.1|FL330790
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211260752|gb|FL356971.1|FL356971
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|211213471|gb|FL339252.1|FL339252
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|149009942|gb|EE041784.2|EE041784
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGEST: gi|511349|gb|T23327.1|T23327
genomic: CCGCAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
EST: GTCGCGCGTCGGCACCG TGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
genomic: GTCGCGCGTCGGCACCGgtgagtcgtc ... ttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACG
aaaatcttgttccaatttactaactaatatgattttcttgtccccttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGACTTGAAATCTCTGCAGAGCGTGGGGCAAATAATTGGAGAGGTTCTCCG
ttttcttgtccccttg CT-rich tract
aatttactaactaata TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gggtagtttaagaagtcccacattacattgtttgtttgttttctgaaaatcttgttccaatttactaactaatatgattttcttgtccccttgcatgcagTGAGAGAAAGCCTTAAAAATGCAAAGAGGGATTTTACCAAGACTGAAGACGACTTGAAATCTCTGCAGAGCGTGGGGCAAATAATTGGAGAGGTTCTCCG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGAGG
- - - - - - - - - - - - - - tgtttgt
- - - - - - - - - - - - - - - - - - - -tttctga