Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...aacatcatgtagtcttatgttatcttgaaaccttgtgctgatccttttgagttttggtaatagtagcgttagttataataatgtgggtatccttgtatagGTTATTCCTGATGTTGCAGCGTTTCCCTGTTGAGTCAAAAGGCCGCCGGAAAAAATTGAATGAG

Basic information

species Zea mays
transcript GRMZM2G171469_T03
intron # 1
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211228599|gb|FL093621.1|FL093621
EST:     TCAGCTACATCCTTGTTCGCTGCCTTTGGTTTCCTTCTCTATGGAGGGAG                         GTTATTCCTGATGTTGCAGCGTTTCCCTGTTGAGTCAAAAGG
genomic: TCAGCTACATCCTTGTTCGCTGCCTTTGGTTTCCTTCTCTATGGAGGGAGgtaatgactt ... ccttgtatagGTTATTCCTGATGTTGCAGCGTTTCCCTGTTGAGTCAAAAGG






















 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tttgagttttggtaatagtagcgttagttataataatgtgggtatccttgtatagGTTATTCCTGATGTTGCAGCGTTTCCCTGTTGAGTCAAAAGGCCGCCGGAAAAAATTGAATGAG
                                          tatcctt  CT-rich tract
                       ttagttataataatgt  TA-rich tract