1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtacacaatacgagccccgccgctaagattctcttgtatggggaaaaggcacaccgacttttgctatgcacgcgaggtgctcgccgaaatgccccagtggtaacattcgctgtctcgctgaaaacggtaccccttaacagGTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGATGCAAATGAGAATCCATATGGTCCACCCCCGGAG
species | Zea mays |
transcript | GRMZM2G170595_T01 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAG GTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGATEST: gi|22489861|gb|BU049784.1|BU049784
genomic: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAGgtacacaata ... cccttaacagGTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGAT
EST: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTCGAG GTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGATEST: gi|78078617|gb|DV507029.1|DV507029
genomic: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAGgtacacaata ... cccttaacagGTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGAT
EST: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAG GTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGATEST: gi|148974572|gb|EE025361.2|EE025361
genomic: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAGgtacacaata ... cccttaacagGTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGAT
EST: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAG GTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGATEST: gi|87153226|gb|DY398015.1|DY398015
genomic: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAGgtacacaata ... cccttaacagGTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGAT
EST: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTCGAG GTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGATEST: gi|91048897|gb|EB159315.1|EB159315
genomic: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAGgtacacaata ... cccttaacagGTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGAT
EST: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAG GTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGATEST: gi|148963664|gb|EE014723.2|EE014723
genomic: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAGgtacacaata ... cccttaacagGTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGAT
EST: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAG GTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGATEST: gi|148932895|gb|EE285676.2|EE285676
genomic: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAGgtacacaata ... cccttaacagGTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGAT
EST: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAG GTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGATEST: gi|78079657|gb|DV508069.1|DV508069
genomic: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAGgtacacaata ... cccttaacagGTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGAT
EST: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAG GTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGATEST: gi|19822775|gb|BQ048799.1|BQ048799
genomic: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAGgtacacaata ... cccttaacagGTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGAT
EST: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTCGAG GTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGATEST: gi|211221376|gb|FL266596.1|FL266596
genomic: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAGgtacacaata ... cccttaacagGTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGAT
EST: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTCGAG GTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGATEST: gi|18650024|gb|BM498843.1|BM498843
genomic: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAGgtacacaata ... cccttaacagGTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGAT
EST: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTCGAG GTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGATEST: gi|89756009|gb|DY686211.1|DY686211
genomic: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAGgtacacaata ... cccttaacagGTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGAT
EST: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAG GTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGATEST: gi|148932277|gb|EC875831.2|EC875831
genomic: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAGgtacacaata ... cccttaacagGTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGAT
EST: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAG GTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGATEST: gi|211221377|gb|FL266597.1|FL266597
genomic: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAGgtacacaata ... cccttaacagGTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGAT
EST: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTCGAG GTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGATEST: gi|76289509|gb|DV029077.1|DV029077
genomic: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAGgtacacaata ... cccttaacagGTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGAT
EST: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAG GTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGATEST: gi|71332195|gb|DR803018.1|DR803018
genomic: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAGgtacacaata ... cccttaacagGTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGAT
EST: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAG GTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGATEST: gi|149109171|gb|EE190055.2|EE190055
genomic: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAGgtacacaata ... cccttaacagGTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGAT
EST: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAG GTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGATEST: gi|211221375|gb|FL266595.1|FL266595
genomic: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAGgtacacaata ... cccttaacagGTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGAT
EST: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTCGAG GTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGATEST: gi|71328633|gb|DR800987.1|DR800987
genomic: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAGgtacacaata ... cccttaacagGTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGAT
EST: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAG GTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGATEST: gi|211221367|gb|FL266587.1|FL266587
genomic: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAGgtacacaata ... cccttaacagGTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGAT
EST: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTCGAG GTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGATEST: gi|149111871|gb|EE191026.2|EE191026
genomic: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAGgtacacaata ... cccttaacagGTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGAT
EST: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAG GTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGAT
genomic: GGCGCCACCTCAGGACCCTCGCCCCGTATCAGCCCATCCTGCCCTTTGAGgtacacaata ... cccttaacagGTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGAT
gaaatgccccagtggtaacattcgctgtctcgctgaaaacggtaccccttaacagGTGTTATCTGCTCGCCTTGGGCGTAGACCAGAGGACATAATCAAGTTGGATGCAAATGAGAATCCATATGGTCCACCCCCGGAG
tggtaac putative branch site (score: 107)
tacccctt putative PPT
taacatt TA-rich tract