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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...attggttgtgtctgatctgaccatgtatcaatgacgggatgcactgcatacagtgagttctgtttgtacgctcatcttcttgtccaattccggttcgcagTGAGCAAACGCGTGTTGTGCTGACCAGCGCTGCGTACGTTCACTTGAAACAAGCAGAGATTTCCAAGTACACCAGGAATCTTGCTCCCGCCAGTCGTGCA

Basic information

species Zea mays
transcript GRMZM2G159307_T02
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G159307_T02 (Zea mays), 3'ss of exon 1
lower sequence: LOC_Os01g12660.1 (Oryza sativa), 3'ss of exon 1
attggttgtgtctgatctgaccatgtatcaatgacgggatgcactgcatacagtgagttctgtttgtacgctcatcttcttgtccaa-ttccggttcgcagTGAGCAAACGCGTGTTGTGCTGACCAGCGCTGCGTACGTTCACTTGAAACAAGCAGAGATTTCCAAGTACACCAGGAATCTTGCTCCCGCCAGTCGTGCA
  | | | |||    | |    |||||    |  |         | ||  |     ||  |  |  |  | |  |||| ||  ||||  |  | || |||| ||||||||||||||  ||||||| ||||| ||||| ||||||||||| |||||||| || ||  | ||||||||||||||||| || || || ||||| 
tctagctctgttctcttttttaatgtacacgtt-catttccttttccaccctccatgtcatcatcctttgtttctctttttccccaaactatgatttgcagCGAGCAAACGCGTGTATTGCTGACAAGCGCGGCGTATGTTCACTTGAAGCAAGCAGACATCTCACAATACACCAGGAATCTTGCACCAGCTAGCCGTGCG