1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtccgttcgcctccccactcccccctatcgagggttcacctcacttggcctcaaccctcctccgttggcgtctccctcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCGACTCCATCGGCGGCCTGGACCAGATCAAGCAGGCGCTCTACGAGCTCG
species | Zea mays |
transcript | GRMZM2G158136_T01 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|149076529|gb|EE165156.2|EE165156
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|148961917|gb|EE012707.2|EE012707
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|78081860|gb|DV510272.1|DV510272
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|211339704|gb|FL204262.1|FL204262
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTTEST: gi|149105403|gb|EE290912.2|EE290912
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|211339708|gb|FL204266.1|FL204266
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCC-TCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|211339712|gb|FL204270.1|FL204270
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTEST: gi|211342099|gb|FL204278.1|FL204278
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagG-ACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATT
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|148949884|gb|EC895380.2|EC895380
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|50334041|gb|CO529167.1|CO529167
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|78085556|gb|DV513949.1|DV513949
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|211339707|gb|FL204265.1|FL204265
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|74244276|gb|DT652190.1|DT652190
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|78121665|gb|DV540049.1|DV540049
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|91876442|gb|EB406399.1|EB406399
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|211339710|gb|FL204268.1|FL204268
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|6021113|gb|AW066041.1|AW066041
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|13178205|gb|BG349463.1|BG349463
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|211339709|gb|FL204267.1|FL204267
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|93283899|gb|EB676163.1|EB676163
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|211342096|gb|FL204275.1|FL204275
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|91050548|gb|EB160966.1|EB160966
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|148954924|gb|EC900412.2|EC900412
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|149077190|gb|EE165854.2|EE165854
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|76923334|gb|DV169435.1|DV169435
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|78075677|gb|DV504111.1|DV504111
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|78115003|gb|DV533391.1|DV533391
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|71435533|gb|DR816583.1|DR816583
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|149089069|gb|EE178236.2|EE178236
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|211339701|gb|FL204259.1|FL204259
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|211342097|gb|FL204276.1|FL204276
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|149072621|gb|EE160848.2|EE160848
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|101390734|gb|EB817301.1|EB817301
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|31354032|gb|CD438389.1|CD438389
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACTTCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|149097605|gb|EE183498.2|EE183498
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|71299646|gb|DR785831.1|DR785831
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|71435645|gb|DR816695.1|DR816695
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|148941166|gb|EC886045.2|EC886045
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|211339706|gb|FL204264.1|FL204264
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|148961232|gb|EE011948.2|EE011948
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|93012345|gb|EB637865.1|EB637865
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|211197640|gb|FL204258.1|FL204258
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|148940585|gb|EC885389.2|EC885389
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|13178206|gb|BG349464.1|BG349464
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|148960540|gb|EE011147.2|EE011147
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|89762253|gb|DY689934.1|DY689934
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|149017489|gb|EE045689.2|EE045689
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|148944282|gb|EC889378.2|EC889378
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCEST: gi|211339703|gb|FL204261.1|FL204261
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
EST: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAG GACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
genomic: AGATCGCCAAGCGCCTCGGCCGGCCCCTCGTCTCCACCACGCCCTATGAGgtccgttcgc ... tcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTC
gggttcacctcacttggcctcaaccctcctccgttggcgtctccctcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCGACTCCATCGGCGGCCTGGACCAGATCAAGCAGGCGCTCTACGAGCTCG
ccctcac putative branch site (score: 275)
tctccctcacc CT-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtccgttcgcctccccactcccccctatcgagggttcacctcacttggcctcaaccctcctccgttggcgtctccctcaccgacagGACGTGATTGCGTGCGACGTCATCAACCCCGACAGCATCGACGTCGAATTCGACTCCATCGGCGGCCTGGACCAGATCAAGCAGGCGCTCTACGAGCTCG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGATCA