1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtgggtggcgacgtaaaggcggccgcttgctttgccaccgccggcgctcgtcatctccttacttattcatccctgcggccctgctacacatcggtgccgtgccgcgcttgattccgtcctgtcctgtgcttgaattgtagGTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGGCGTTGCGTTAGGTCCGCGGTTGGTGAGCGGCGGTCGGAGCGGTCTCGCG
species | Zea mays |
transcript | GRMZM2G155348_T01 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAA GTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGGEST: gi|149112970|gb|EE295755.2|EE295755
genomic: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAGgtgggtggcg ... tgaattgtagGTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGG
EST: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAG GTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGGEST: gi|78089704|gb|DV518078.1|DV518078
genomic: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAGgtgggtggcg ... tgaattgtagGTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGG
EST: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAG GTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGGEST: gi|211320724|gb|FL358335.1|FL358335
genomic: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAGgtgggtggcg ... tgaattgtagGTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGG
EST: TCCAGTGCTGGCTGCCGGCCA-CTCCGCCCCCGGGGTCCTTGAGCTGGAG GTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGGEST: gi|211258052|gb|FL344582.1|FL344582
genomic: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAGgtgggtggcg ... tgaattgtagGTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGG
EST: AGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAG GTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGGEST: gi|211031026|gb|FL333346.1|FL333346
genomic: AGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAGgtgggtggcg ... tgaattgtagGTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGG
EST: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAG GTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGGEST: gi|149109828|gb|EE293622.2|EE293622
genomic: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAGgtgggtggcg ... tgaattgtagGTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGG
EST: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAG GTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGGEST: gi|211481224|gb|FL364143.1|FL364143
genomic: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAGgtgggtggcg ... tgaattgtagGTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGG
EST: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAG GTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGGEST: gi|88755787|gb|DY539928.1|DY539928
genomic: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAGgtgggtggcg ... tgaattgtagGTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGG
EST: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAG GTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGGEST: gi|211163530|gb|FL327749.1|FL327749
genomic: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAGgtgggtggcg ... tgaattgtagGTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGG
EST: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAG GTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGGEST: gi|78107373|gb|DV525791.1|DV525791
genomic: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAGgtgggtggcg ... tgaattgtagGTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGG
EST: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAG GTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGGEST: gi|148991617|gb|EE033151.2|EE033151
genomic: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAGgtgggtggcg ... tgaattgtagGTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGG
EST: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAG GTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGGEST: gi|93014677|gb|EB640197.1|EB640197
genomic: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAGgtgggtggcg ... tgaattgtagGTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGG
EST: GGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAG GTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGGEST: gi|149085937|gb|EE175465.2|EE175465
genomic: GGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAGgtgggtggcg ... tgaattgtagGTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGG
EST: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAG GTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGGEST: gi|149081007|gb|EE170107.2|EE170107
genomic: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAGgtgggtggcg ... tgaattgtagGTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGG
EST: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAG GTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGGEST: gi|211052990|gb|FL348451.1|FL348451
genomic: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAGgtgggtggcg ... tgaattgtagGTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGG
EST: CAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAG GTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGGEST: gi|211210782|gb|FL332659.1|FL332659
genomic: CAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAGgtgggtggcg ... tgaattgtagGTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGG
EST: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAG GTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGGEST: gi|211140195|gb|FL362162.1|FL362162
genomic: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAGgtgggtggcg ... tgaattgtagGTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGG
EST: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAG GTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGGEST: gi|211528534|gb|FL329333.1|FL329333
genomic: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAGgtgggtggcg ... tgaattgtagGTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGG
EST: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAG GTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGGEST: gi|211325062|gb|FL357896.1|FL357896
genomic: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAGgtgggtggcg ... tgaattgtagGTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGG
EST: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAG GTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGGEST: gi|148957044|gb|EC903004.2|EC903004
genomic: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAGgtgggtggcg ... tgaattgtagGTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGG
EST: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAG GTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGGEST: gi|33467649|gb|CF244698.1|CF244698
genomic: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAGgtgggtggcg ... tgaattgtagGTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGG
EST: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAG GTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGGEST: gi|76014158|gb|DT941328.1|DT941328
genomic: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAGgtgggtggcg ... tgaattgtagGTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGG
EST: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAG GTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGG
genomic: TCCAGTGCTGGCTGCCGGCCAGCTCCGCCCCCGGGGTCCTTGAGCTGGAGgtgggtggcg ... tgaattgtagGTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGG
acacatcggtgccgtgccgcgcttgattccgtcctgtcctgtgcttgaattgtagGTGGCGGTGGATGACCAGCTCTCGGAGTTTTCTGAGGCGAGGATCGGAGGGCGTTGCGTTAGGTCCGCGGTTGGTGAGCGGCGGTCGGAGCGGTCTCGCG
gcttgat putative branch site (score: 5)
ttgaatt TA-rich tract