1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
...ggtggggggggggggggggtgcaatatatttctcccttctgaaatattacactattttacatgaactcaagaataaccactgttatatttttcttgtcagGAAAAGTATTGCTCCTAGCCTCCTACAGCTAGTTCTTTTTATGATTAAGCTCCAATGAAGGATTCTCAG
species | Zea mays |
transcript | GRMZM2G154221_T01 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: AGTCTCGGTCGTGGCGACGACGACTGGGCAGGCCGACGAGCACCCACCAG GAAAAGTATTGCTCCTAGCCTCCTACAGCTAGTTCTTTTTATGATTAAGCTEST: gi|33467119|gb|CF244168.1|CF244168
genomic: AGTCTCGGTCGTGGCGACGACGACTGGGCAGGCCGACGAGCACCCACCAGgtatcccacc ... ttcttgtcagGAAAAGTATTGCTCCTAGCCTCCTACAGCTAGTTCTTTTTATGATTAAGCT
EST: AGTCTCGGTCGTGGCGACGACGACTGGGCAGGCCGACGAGCACCCACCAG GAAAAGTATTGCTCCTAGCCTCCTACAGCTAGTTCTTTTTATGATTAAGCTEST: gi|50327503|gb|CO522629.1|CO522629
genomic: AGTCTCGGTCGTGGCGACGACGACTGGGCAGGCCGACGAGCACCCACCAGgtatcccacc ... ttcttgtcagGAAAAGTATTGCTCCTAGCCTCCTACAGCTAGTTCTTTTTATGATTAAGCT
EST: AGTCTCGGTCGTGGCGACGACGACTGGGCAGGCCGACGAGCACCCACCAG GAAAAGTATTGCTCCTAGCCTCCTACAGCTAGTTCTTTTTATGATTAAGCTEST: gi|78118653|gb|DV537037.1|DV537037
genomic: AGTCTCGGTCGTGGCGACGACGACTGGGCAGGCCGACGAGCACCCACCAGgtatcccacc ... ttcttgtcagGAAAAGTATTGCTCCTAGCCTCCTACAGCTAGTTCTTTTTATGATTAAGCT
EST: AGTCTCGGTCGTGGCGACGACGACTGGGCAGGCCGACGAGCACCCACCAG GAAAAGTATTGCTCCTAGCCTCCTACAGCTAGTTCTTTTTATGATTAAGCTEST: gi|78084282|gb|DV512675.1|DV512675
genomic: AGTCTCGGTCGTGGCGACGACGACTGGGCAGGCCGACGAGCACCCACCAGgtatcccacc ... ttcttgtcagGAAAAGTATTGCTCCTAGCCTCCTACAGCTAGTTCTTTTTATGATTAAGCT
EST: AGTCTCGGTCGTGGCGACGACGACTGGGCAGGCCGACGAGCACCCACCAG GAAAAGTATTGCTCCTAGCCTCCTACAGCTAGTTCTTTTTATGATTAAGCT
genomic: AGTCTCGGTCGTGGCGACGACGACTGGGCAGGCCGACGAGCACCCACCAGgtatcccacc ... ttcttgtcagGAAAAGTATTGCTCCTAGCCTCCTACAGCTAGTTCTTTTTATGATTAAGCT
attacactattttacatgaactcaagaataaccactgttatatttttcttgtcagGAAAAGTATTGCTCCTAGCCTCCTACAGCTAGTTCTTTTTATGATTAAGCTCCAATGAAGGATTCTCAG
gaataac putative branch site (score: 2)
tttttcttgtc putative PPT
tgttatatttttctt TA-rich tract