1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtaaagacctggcccgaccaaatttcggatctttgggttcagggttctttgaatcccgcttcttcactggaatggttgatgagggtcttttgtttgtatgggcagGTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCCGGG
species | Zea mays |
transcript | GRMZM2G151863_T04 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTG GTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCEST: gi|211092351|gb|FL156509.1|FL156509
genomic: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTGgtaaagacct ... gtatgggcagGTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTC
EST: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTG GTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCCEST: gi|211097293|gb|FL156532.1|FL156532
genomic: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTGgtaaagacct ... gtatgggcagGTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCC
EST: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTG GTGGCCAGCGCCGAGGMCGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCTEST: gi|211094822|gb|FL156520.1|FL156520
genomic: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTGgtaaagacct ... gtatgggcagGTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCC
EST: AGCTCMMCTCACTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTG GTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCCEST: gi|211094831|gb|FL156529.1|FL156529
genomic: AGCTCCCCTC-CTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTGgtaaagacct ... gtatgggcagGTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCC
EST: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTG GTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCCEST: gi|211087426|gb|FL156471.1|FL156471
genomic: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTGgtaaagacct ... gtatgggcagGTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCC
EST: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTG GTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCCEST: gi|211089875|gb|FL156485.1|FL156485
genomic: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTGgtaaagacct ... gtatgggcagGTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCC
EST: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTG GTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCCEST: gi|149008091|gb|EE040331.2|EE040331
genomic: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTGgtaaagacct ... gtatgggcagGTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCC
EST: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTG GTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCCEST: gi|211092345|gb|FL156503.1|FL156503
genomic: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTGgtaaagacct ... gtatgggcagGTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCC
EST: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTG GTGGCCAGCGCCGAGGAMGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCCEST: gi|211097303|gb|FL156542.1|FL156542
genomic: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTGgtaaagacct ... gtatgggcagGTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCC
EST: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTG GTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCCEST: gi|116817361|gb|EC860203.1|EC860203
genomic: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTGgtaaagacct ... gtatgggcagGTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCC
EST: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTG GTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGACGCGCCEST: gi|211092352|gb|FL156510.1|FL156510
genomic: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTGgtaaagacct ... gtatgggcagGTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCC
EST: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTG GTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCCEST: gi|211094821|gb|FL156519.1|FL156519
genomic: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTGgtaaagacct ... gtatgggcagGTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCC
EST: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTG GTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCCEST: gi|211092342|gb|FL156500.1|FL156500
genomic: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTGgtaaagacct ... gtatgggcagGTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCC
EST: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTG GTGGCCAGCGCCGAGGACGACGCGTCGGGGGGTCTCTCTGGGCCGCCGCGCEST: gi|149055348|gb|EE156262.2|EE156262
genomic: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTGgtaaagacct ... gtatgggcagGTGGCCAGCGCCGAGGACGACGCGTCGGGGG-TCTCTCTGGGCCGCCGCGC
EST: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTG GTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCCEST: gi|211087431|gb|FL156476.1|FL156476
genomic: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTGgtaaagacct ... gtatgggcagGTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCC
EST: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTG GTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCCEST: gi|211097299|gb|FL156538.1|FL156538
genomic: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTGgtaaagacct ... gtatgggcagGTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCC
EST: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTG GTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCCEST: gi|211092347|gb|FL156505.1|FL156505
genomic: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTGgtaaagacct ... gtatgggcagGTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCC
EST: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTG GTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCCEST: gi|211087427|gb|FL156472.1|FL156472
genomic: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTGgtaaagacct ... gtatgggcagGTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCC
EST: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTG GTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCCEST: gi|211542042|gb|FL156465.1|FL156465
genomic: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTGgtaaagacct ... gtatgggcagGTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCC
EST: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTG GTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCCEST: gi|211097302|gb|FL156541.1|FL156541
genomic: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTGgtaaagacct ... gtatgggcagGTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCC
EST: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTG G---CCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCCEST: gi|211097294|gb|FL156533.1|FL156533
genomic: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTGgtaaagacct ... gtatgggcagGTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCC
EST: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTG GTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCCEST: gi|211087433|gb|FL156478.1|FL156478
genomic: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTGgtaaagacct ... gtatgggcagGTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCC
EST: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTG GTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCCEST: gi|211089876|gb|FL156486.1|FL156486
genomic: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTGgtaaagacct ... gtatgggcagGTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCC
EST: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTG GTGGCCAGCTCCGAGGACGACGCGTCGGGGGGTCTCTCTGGGCCGCCGCGCEST: gi|211542039|gb|FL156462.1|FL156462
genomic: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTGgtaaagacct ... gtatgggcagGTGGCCAGCGCCGAGGACGACGCGTCGGGGG-TCTCTCTGGGCCGCCGCGC
EST: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTG GTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCCEST: gi|211094826|gb|FL156524.1|FL156524
genomic: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTGgtaaagacct ... gtatgggcagGTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCC
EST: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTG GTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCCEST: gi|211542045|gb|FL156468.1|FL156468
genomic: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTGgtaaagacct ... gtatgggcagGTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCC
EST: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTG GTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCCEST: gi|211094819|gb|FL156517.1|FL156517
genomic: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTGgtaaagacct ... gtatgggcagGTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCC
EST: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTG GTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCC
genomic: GAGCTCCCCTCCTCCTCGCCATCGTCGTTCTCGCGCTTGGCGTATCCGTGgtaaagacct ... gtatgggcagGTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCC
gaatcccgcttcttcactggaatggttgatgagggtcttttgtttgtatgggcagGTGGCCAGCGCCGAGGACGACGCGTCGGGGGTCTCTCTGGGCCGCCGCGCCGGG
ggttgat putative branch site (score: 5)
ttttgttt TA-rich tract