Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtacgtcgatcgcgcttagtgtcagtggtgttagttccggtgggggttatgagttgtgcgggttctgacttggggttttgtgtgtttgtgctatgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGGGAGGACTATGGCCGTCTCGTTGTCATCGTCGATGTGGTCGACCAGAACA

Basic information

species Zea mays
transcript GRMZM2G140116_T01
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G140116_T01 (Zea mays), 3'ss of exon 1
lower sequence: LOC_Os02g40880.1 (Oryza sativa), 3'ss of exon 1
------------------gtacgtcg----atcgcgcttagtgt--cagtggtgttagttccggtgggggttatgagt-tgtgcgggttctgacttggggttttgtgtgtttgtgctatgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGGGAGGACTATGGCCGTCTCGTTGTCATCGTCGATGTGGTCGACCAGAACA
                  |  |||||      |||  ||   ||  | |||||| | ||   ||||| | ||  || |  | ||| ||  |     ||||||||     |||||||  | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||| ||||| ||||| |||||||| ||||| |||||||||||| 
gtaggtggatcgccgtgggctcgtcgtcttgccgccgttgccgttccggtggtggtggtggtggtggtgctttggattgcgcgcgtgtgtttgaccggggtttt-----tttgtgcctttcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGGGTGGCCCTGGTGAACTACGGCAAGGACTACGGCCGCCTCGTCGTCATCGTTGATGTCGTCGACCAGAACC

upper sequence: GRMZM2G140116_T01 (Zea mays), 3'ss of exon 1
lower sequence: AT2G20450.1 (Arabidopsis thaliana), 3'ss of exon 1
----------------------------------------------gtacgtcgatcgcgct--tagtgtcagtggtgttagttccggtgggggttatgagttgtgcgggttc---tgacttggggttttgtgtg-tttgtgctatgc-gtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGGGAGGACTATGGCCGTCTCGTTGTCATCGTCGATGTGGTCGACCAGAACA
                                                || |  |     ||  || || |   | || |  |  |  |||   || | |  | | | | ||    |   ||      | | |   |||||| |     ||| ||   || ||||| ||||||||||| ||| | ||||| || || |||||||| ||||| |||||    ||||| || ||||||||||| |||||||| ||||
gtgagcgatgttcttcgcttgattccatgtattttagtgtttctgaaaactttaaagattctgctattgccctagctgct--tctctttggaatttgttatctttacagatttatatagtttttaacctcgagaactttgtgtttgattgtgaagGGTTTTAAGAGATTCGTGGAGATTGGGAGAGTGGCGCTCGTTAACTACGGCGAGGATTATGGAAAGCTCGTGGTTATCGTCGATGTAGTCGACCAAAACA
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|32911809|gb|CF016621.1|CF016621
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211533761|gb|FL303615.1|FL303615
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211530756|gb|FL303602.1|FL303602
EST:     CCCACTCGCTCCAGCCGCTTCACCGCG--GCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|15079886|gb|BI388867.1|BI388867
EST:     CGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211536770|gb|FL303629.1|FL303629
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCG-CACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211143363|gb|FL303692.1|FL303692
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211261808|gb|FL064149.1|FL064149
EST:     AGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: AGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211527752|gb|FL303583.1|FL303583
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211146222|gb|FL303713.1|FL303713
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|40336326|gb|CK370396.1|CK370396
EST:     CGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211372372|gb|FL088523.1|FL088523
EST:     CCACACGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|67022364|gb|CO451113.1|CO451113
EST:     TCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: TCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211542796|gb|FL303661.1|FL303661
EST:     CCCACACGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211536765|gb|FL303624.1|FL303624
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCTACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|32910529|gb|CF015341.1|CF015341
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|113702161|gb|EE679665.1|EE679665
EST:     AGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: AGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|15313541|gb|BI478750.1|BI478750
EST:     GCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: GCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211143352|gb|FL303681.1|FL303681
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211261811|gb|FL064152.1|FL064152
EST:     CAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211536771|gb|FL303630.1|FL303630
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211415711|gb|FL382761.1|FL382761
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211527753|gb|FL303584.1|FL303584
EST:     CCCACTCGCTCCAACCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211539782|gb|FL303647.1|FL303647
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGRKSGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211530749|gb|FL303595.1|FL303595
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211524749|gb|FL303573.1|FL303573
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211144789|gb|FL303700.1|FL303700
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211536769|gb|FL303628.1|FL303628
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|87155926|gb|DY400715.1|DY400715
EST:     GCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: GCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211533760|gb|FL303614.1|FL303614
EST:     CCCACTCGCTCCAG-C-CTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|22545563|gb|BU097922.1|BU097922
EST:     CCCACACGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211229609|gb|FL380026.1|FL380026
EST:     ACCGCGCCGCCACCG-CACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: ACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211533755|gb|FL303609.1|FL303609
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211530750|gb|FL303596.1|FL303596
EST:     CACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGNTGAACTACGGG
genomic: CACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211143351|gb|FL303680.1|FL303680
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211146218|gb|FL303709.1|FL303709
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211542785|gb|FL303650.1|FL303650
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211533763|gb|FL303617.1|FL303617
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211146220|gb|FL303711.1|FL303711
EST:     CCCACACGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211542797|gb|FL303662.1|FL303662
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211533751|gb|FL303605.1|FL303605
EST:     CCCACACGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|60349639|gb|DN216612.1|DN216612
EST:     CGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|31664511|gb|CD573444.1|CD573444
EST:     TCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: TCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211144787|gb|FL303698.1|FL303698
EST:     CCCASTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211141913|gb|FL303665.1|FL303665
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCG-CACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|29130154|gb|CB380858.1|CB380858
EST:     GCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: GCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211530745|gb|FL303591.1|FL303591
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|60343863|gb|DN210836.1|DN210836
EST:     CCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211261814|gb|FL064155.1|FL064155
EST:     AGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: AGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|37393120|gb|CF633817.1|CF633817
EST:     CGCTTCACCGCGCCGCCACCGCCACCGNGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211143361|gb|FL303690.1|FL303690
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCG-CACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211527756|gb|FL303587.1|FL303587
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|32851326|gb|CD991007.1|CD991007
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211143357|gb|FL303686.1|FL303686
EST:     CCCACACGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211536774|gb|FL303633.1|FL303633
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|60341459|gb|DN208432.1|DN208432
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|60354734|gb|DN221707.1|DN221707
EST:     TCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: TCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|32912862|gb|CF017674.1|CF017674
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|71417121|gb|DR803927.1|DR803927
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211542787|gb|FL303652.1|FL303652
EST:     CCCACACGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211539777|gb|FL303642.1|FL303642
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|61119757|gb|DN560718.1|DN560718
EST:     TCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211527749|gb|FL303580.1|FL303580
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211144785|gb|FL303696.1|FL303696
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCATGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211527751|gb|FL303582.1|FL303582
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGG-CCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|32908584|gb|CF013397.1|CF013397
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211533764|gb|FL303618.1|FL303618
EST:     CCCACACGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|32933013|gb|CF037825.1|CF037825
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211542788|gb|FL303653.1|FL303653
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGSCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211533752|gb|FL303606.1|FL303606
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211533754|gb|FL303608.1|FL303608
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211144784|gb|FL303695.1|FL303695
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211530748|gb|FL303594.1|FL303594
EST:     AGCCGCTTCACCGCGCCGCCACCG-CACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: AGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211143355|gb|FL303684.1|FL303684
EST:     ACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: ACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|60348097|gb|DN215070.1|DN215070
EST:     TCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: TCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211141917|gb|FL303669.1|FL303669
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|32912436|gb|CF017248.1|CF017248
EST:     GCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211524745|gb|FL303569.1|FL303569
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGG-CCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211524742|gb|FL303566.1|FL303566
EST:     CCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCCTGGCCCTGGTGAACTACGGG
genomic: CCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|60357236|gb|DN224209.1|DN224209
EST:     CCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211144790|gb|FL303701.1|FL303701
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGG-CCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211542784|gb|FL303649.1|FL303649
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211146223|gb|FL303714.1|FL303714
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211261810|gb|FL064151.1|FL064151
EST:     AGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: AGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|60399266|gb|DN232080.1|DN232080
EST:     CTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211536768|gb|FL303627.1|FL303627
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCNACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211542786|gb|FL303651.1|FL303651
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCG-CACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|32911128|gb|CF015940.1|CF015940
EST:     GCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211141915|gb|FL303667.1|FL303667
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211141916|gb|FL303668.1|FL303668
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTAC-GC
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|32908470|gb|CF013283.1|CF013283
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211536764|gb|FL303623.1|FL303623
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211533750|gb|FL303604.1|FL303604
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGKGGAGATCGGGCGTGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211144794|gb|FL303705.1|FL303705
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211539783|gb|FL303648.1|FL303648
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211141925|gb|FL303677.1|FL303677
EST:     CCCACACGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211141919|gb|FL303671.1|FL303671
EST:     CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
EST: gi|211536763|gb|FL303622.1|FL303622
EST:     CCCACACGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATG                         CCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG
genomic: CCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1543

AGTTTCTGGTTTATCTTCCACCGCGCTTCGCCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGGGAGGACTATGGCCGTCTCGTTGTCATCGTCGATGTGGTCGACCAGAACA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1603

AGTTTCTGGTTTATCTTCCACCGCGCTTCGCCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGGGAGGACTATGGCCGTCTCGTTGTCATCGTCGATGTGGTCGACCAGAACA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1203

AGTTTCTGGTTTATCTTCCACCGCGCTTCGCCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGGGAGGACTATGGCCGTCTCGTTGTCATCGTCGATGTGGTCGACCAGAACA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 831

AGTTTCTGGTTTATCTTCCACCGCGCTTCGCCCACTCGCTCCAGCCGCTTCACCGCGCCGCCACCGCCACCGCGAGGATGgtacgtcgat ... atgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGGGAGGACTATGGCCGTCTCGTTGTCATCGTCGATGTGGTCGACCAGAACA




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tatgagttgtgcgggttctgacttggggttttgtgtgtttgtgctatgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGGGAGGACTATGGCCGTCTCGTTGTCATCGTCGATGTGGTCGACCAGAACA
               ttctgac  putative branch site (score: 831)
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtacgtcgatcgcgcttagtgtcagtggtgttagttccggtgggggttatgagttgtgcgggttctgacttggggttttgtgtgtttgtgctatgcgtgcagCCGTTCAAGAGGTTCGTGGAGATCGGGCGCGTGGCCCTGGTGAACTACGGGGAGGACTATGGCCGTCTCGTTGTCATCGTCGATGTGGTCGACCAGAACA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA