1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtgagatctctctcgtccttgctctagcgcttgttgcatcttcgctgcgctgcagccatggatttggcctcgcccttacgaacccctgacgtgcggcggctcttgttttgtggttccagGTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGT
species | Zea mays |
transcript | GRMZM2G126594_T02 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GTATCTCAACTCTGCCCCGAGACCT-CCCCCCTCGCTGGTCTCAGCCATG GTGAAATATTCGACGGAGCCGACCAACCCCACCAAGTEST: gi|211490990|gb|FL061102.1|FL061102
genomic: GTATCTCAACTCCGCCTCGAGACCTCCCCCCCTCGCTGGTCTCAGCCATGgtgagatctc ... gtggttccagGTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGT
EST: GTATCTCAACTCCGCCTCGAGACCT-CCCCCCTCGCTGGTCTCAGCCATG GTGAAATATTCGACGGAGCCGACCAACCCCACCAAGTEST: gi|67034878|gb|CO463411.1|CO463411
genomic: GTATCTCAACTCCGCCTCGAGACCTCCCCCCCTCGCTGGTCTCAGCCATGgtgagatctc ... gtggttccagGTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGT
EST: AGACCT-CCCCCCTCGCTGGTCTCAGCCATG GTGAAATATTCGACGGAGCCGACCAACCCCACCAAGTEST: gi|14701464|gb|BI233882.1|BI233882
genomic: AGACCTCCCCCCCTCGCTGGTCTCAGCCATGgtgagatctc ... gtggttccagGTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGT
EST: ATCTCAACTCCGCCTCGAGACCTTCCCCCCTCGCTGGTCTCAGCCATG GTGAAATATTCGACGGAGCCGACCAACCCCACCAAGTEST: gi|13149648|gb|BG319970.1|BG319970
genomic: ATCTCAACTCCGCCTCGAGACCTCCCCCCCTCGCTGGTCTCAGCCATGgtgagatctc ... gtggttccagGTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGT
EST: GTATCTCAACTCCGCCTCGAGACCTTCCCCCCTCGCTGGTCTCAGCCATG GTGAAATATTCGACGGAGCCGACCAACCCCACCAAGTEST: gi|76011925|gb|DT939095.1|DT939095
genomic: GTATCTCAACTCCGCCTCGAGACCTCCCCCCCTCGCTGGTCTCAGCCATGgtgagatctc ... gtggttccagGTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGT
EST: GTATCTCAACTCCGCCTCGAGACCTNNNNNNNTCGCTGGTCTCAGCCATG GTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGTEST: gi|67025568|gb|CO454317.1|CO454317
genomic: GTATCTCAACTCCGCCTCGAGACCTCCCCCCCTCGCTGGTCTCAGCCATGgtgagatctc ... gtggttccagGTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGT
EST: GTATCTCAACTCCGCCTCGAGACCT-CCCCCCTCGCTGGTCTCAGCCATG GTGAAATATTCGACGGAGCCGACCAACCCCACCAAGTEST: gi|29947113|gb|CB816488.1|CB816488
genomic: GTATCTCAACTCCGCCTCGAGACCTCCCCCCCTCGCTGGTCTCAGCCATGgtgagatctc ... gtggttccagGTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGT
EST: TCGCTGGTCTCAGCCATG G-GAAATATTCGACGGAGCCGTCCAACCCCACCAAGTEST: gi|33770648|gb|CF272942.1|CF272942
genomic: TCGCTGGTCTCAGCCATGgtgagatctc ... gtggttccagGTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGT
EST: GTATCTCAACTCCGCCTCGAGACCTNNNNNNNTCGCTGGTCTCAGCCATG GTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGTEST: gi|211496762|gb|FL061129.1|FL061129
genomic: GTATCTCAACTCCGCCTCGAGACCTCCCCCCCTCGCTGGTCTCAGCCATGgtgagatctc ... gtggttccagGTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGT
EST: GTATCTCAACTCCGCCTCGAGACCTNNNNNNNTCGCTGGTCTCAGCCATG GTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGTEST: gi|50333911|gb|CO529037.1|CO529037
genomic: GTATCTCAACTCCGCCTCGAGACCTCCCCCCCTCGCTGGTCTCAGCCATGgtgagatctc ... gtggttccagGTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGT
EST: GTATCTCAACTCCGCCTCGAGACCTNNNNNNNTCGCTGGTCTCAGCCATG GTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGTEST: gi|211490997|gb|FL061109.1|FL061109
genomic: GTATCTCAACTCCGCCTCGAGACCTCCCCCCCTCGCTGGTCTCAGCCATGgtgagatctc ... gtggttccagGTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGT
EST: GTATCTCAACTCCGCCTCGAGACCT-CCCCCCTCGCTGGTCTCAGCCATG GTGAAATATTCGACGGAGCCGACCAACCCCACCAAGTEST: gi|211490989|gb|FL061101.1|FL061101
genomic: GTATCTCAACTCCGCCTCGAGACCTCCCCCCCTCGCTGGTCTCAGCCATGgtgagatctc ... gtggttccagGTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGT
EST: GTATCTCAACTCCGCCTCGAGACCT-CCCCCCTCGCTGGTCTCAGCCATG GTGAAATATTCGACGGAGCCGACCAACCCCACCAAGTEST: gi|211493873|gb|FL061115.1|FL061115
genomic: GTATCTCAACTCCGCCTCGAGACCTCCCCCCCTCGCTGGTCTCAGCCATGgtgagatctc ... gtggttccagGTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGT
EST: GTATCTCAACTCCGCCTCGAGACCTNNNNNNNTCGCTGGTCTCAGCCATG GTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGTEST: gi|33102839|gb|CF062799.1|CF062799
genomic: GTATCTCAACTCCGCCTCGAGACCTCCCCCCCTCGCTGGTCTCAGCCATGgtgagatctc ... gtggttccagGTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGT
EST: GTATCTCAACTCCGCCTCGAGACCT-CCCCCCTCGCTGGTCTCAGCCATG GTGAAATATTCGACGGAGCCGACCAACCCCACCAAGTEST: gi|211496759|gb|FL061126.1|FL061126
genomic: GTATCTCAACTCCGCCTCGAGACCTCCCCCCCTCGCTGGTCTCAGCCATGgtgagatctc ... gtggttccagGTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGT
EST: GTATCTCAACTCCGCCTCGAGACCTTCCCCCCTCGCTGGTCTCAGCCATG GTGAAATATTCGACGGAGCCGACCAACCCCACCAAGTEST: gi|108824025|gb|EC278033.1|EC278033
genomic: GTATCTCAACTCCGCCTCGAGACCTCCCCCCCTCGCTGGTCTCAGCCATGgtgagatctc ... gtggttccagGTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGT
EST: GTATCTCAACTCCGCCTCGAGACCTNNNNNNNTCGCTGGTCTCAGCCATG GTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGTEST: gi|32910969|gb|CF015781.1|CF015781
genomic: GTATCTCAACTCCGCCTCGAGACCTCCCCCCCTCGCTGGTCTCAGCCATGgtgagatctc ... gtggttccagGTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGT
EST: GTATCTCAACTCTGCCCCGAGACCT-CCCCCCTCGCTGGTCTCAGCCATG GTGAAATATTCGACGGAGCCGACCAACCCCACCAAGTEST: gi|31664276|gb|CD573001.1|CD573001
genomic: GTATCTCAACTCCGCCTCGAGACCTCCCCCCCTCGCTGGTCTCAGCCATGgtgagatctc ... gtggttccagGTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGT
EST: GTATCTCAACTCCGCCTCGAGACCTNNNNNNNTCGCTGGTCTCAGCCATG GTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGTEST: gi|30088089|gb|CB886294.1|CB886294
genomic: GTATCTCAACTCCGCCTCGAGACCTCCCCCCCTCGCTGGTCTCAGCCATGgtgagatctc ... gtggttccagGTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGT
EST: GTATCTCAACTCCGCCTCGAGACCTNNNNNNNTCGCTGGTCTCAGCCATG GTGAAATATTCGACGGAGCCG-CCAACCCCACCAAGTEST: gi|211496760|gb|FL061127.1|FL061127
genomic: GTATCTCAACTCCGCCTCGAGACCTCCCCCCCTCGCTGGTCTCAGCCATGgtgagatctc ... gtggttccagGTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGT
EST: GTATCTCAACTCCGCCTCGAGACCT-CCCCCCTCGCTGGTCTCAGCCATG GTGAAATATTCGACGGAGCCGACCAACCCCACCAAGTEST: gi|4730495|gb|AI649661.1|AI649661
genomic: GTATCTCAACTCCGCCTCGAGACCTCCCCCCCTCGCTGGTCTCAGCCATGgtgagatctc ... gtggttccagGTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGT
EST: TCGCTGGTCTCAGCCATG GNGAAATATTCGACGGAGCCGTCCAACCCCACCAAGTEST: gi|213172413|gb|FM189295.1|FM189295
genomic: TCGCTGGTCTCAGCCATGgtgagatctc ... gtggttccagGTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGT
EST: GTATCTCAACTCTGCCCCGAGACCT-CCCCCCTCGCTGGTCTCAGCCATG GTGAAATATTCGACGGAGCCGACCAACCCCACCAAGTEST: gi|31358169|gb|CD442526.1|CD442526
genomic: GTATCTCAACTCCGCCTCGAGACCTCCCCCCCTCGCTGGTCTCAGCCATGgtgagatctc ... gtggttccagGTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGT
EST: CGAGACCTTCCCCCCTCGCTGGTCTCAGCCATG GTGAAATATTCGACGGAGCCGACCAACCCCACCAAGTEST: gi|71434744|gb|DR815794.1|DR815794
genomic: CGAGACCTCCCCCCCTCGCTGGTCTCAGCCATGgtgagatctc ... gtggttccagGTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGT
EST: GTATCTCAACTCCGCCTCGAGACCTNNNNNNNTCGCTGGTCTCAGCCATG GTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGTEST: gi|50329073|gb|CO524199.1|CO524199
genomic: GTATCTCAACTCCGCCTCGAGACCTCCCCCCCTCGCTGGTCTCAGCCATGgtgagatctc ... gtggttccagGTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGT
EST: GTATCTCAACTCCGCCTCGAGACCTNNNNNNNTCGCTGGTCTCAGCCATG GTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGTEST: gi|211199565|gb|FL177986.1|FL177986
genomic: GTATCTCAACTCCGCCTCGAGACCTCCCCCCCTCGCTGGTCTCAGCCATGgtgagatctc ... gtggttccagGTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGT
EST: GTATCTCAACTCCGCCTCGAGACCTNNNNNNNTCGCTGGTCTCAGCCATG GTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGTEST: gi|76912497|gb|DV164761.1|DV164761
genomic: GTATCTCAACTCCGCCTCGAGACCTCCCCCCCTCGCTGGTCTCAGCCATGgtgagatctc ... gtggttccagGTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGT
EST: GTATCTCAACTCCGCCTCGAGACCTNNNNNNNTCGCTGGTCTCAGCCATG GTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGT
genomic: GTATCTCAACTCCGCCTCGAGACCTCCCCCCCTCGCTGGTCTCAGCCATGgtgagatctc ... gtggttccagGTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGT
tggcctcgcccttacgaacccctgacgtgcggcggctcttgttttgtggttccagGTGAAATATTCGACGGAGCCGTCCAACCCCACCAAGT
ccctgac putative branch site (score: 3)
ttgtttt TA-rich tract