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 5'  3'   		2  
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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...gtccatcaattttgaattgttacagtactgaatgagtcctcagagtgcatagtgttgttctctttttatgtgcctgatagttggtcctcttgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTAAGACTGTGGACCTCTATGTCCCCAGGAAGTG

Basic information

species Zea mays
transcript GRMZM2G125300_T02
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G125300_T02 (Zea mays), 3'ss of exon 1
lower sequence: LOC_Os03g46490.1 (Oryza sativa), 3'ss of exon 1
---gtccatcaattttgaattgttacagtactgaatgagtcctcagagtgcatagtgttgttctctttttatgtg-cctgatagttggtcctcttgtatttcagTTGCTCTTGCGGTAGTTCCCCCA---ACTGTCACCATGCAGAACGAGGAGGGTAAGACTGTGGACCTCTATGTCCCCAGGAAGTG
   |     ||| ||  |  |      |  || |  |||||      ||  ||    |  |  || | |||||    ||||  |||    | | ||  ||  ||||||| ||| |||  || |  ||   || |||| ||||||||||||||||||| |||  ||||||||||| ||||||||||||||
actgcatgccaagttctatctagagaggggct-agcgagtctgtttcgt-tattccat-atattcgtattatgcaatctgactgtttcatc-catgccttgtagTTGCTGTTGTGGTGTTTTCTTCATCTACCGTCATCATGCAGAACGAGGAGGGTCAGATGGTGGACCTCTACGTCCCCAGGAAGTG
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211081220|gb|FL122180.1|FL122180
EST:     GCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTACGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|32836843|gb|CD976521.1|CD976521
EST:     AGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: AGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|211133498|gb|FL122205.1|FL122205
EST:     GCCCTAGCACCCGCGASGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|211083959|gb|FL122199.1|FL122199
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGACCTGCCCAG                         TTGCTCTTTG-AGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGT
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTC-TTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGT
EST: gi|32843553|gb|CD983234.1|CD983234
EST:     GCCGCCCGGGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCCG-CCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|15499195|gb|BI595708.1|BI595708
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCACAACTGTCAACATGCAGAACGAGGAGGGTA
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|32843396|gb|CD983077.1|CD983077
EST:     GCCGCCCGGGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCCG-CCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|211133496|gb|FL122203.1|FL122203
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGACCTGCCCAG                         TTGCTCTTTG-AGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGT
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTC-TTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGT
EST: gi|211181607|gb|FL122698.1|FL122698
EST:     GACGAGCAGGATCTGCCCAG                         TTGCTCTTGCCCTTA-TTCACCCAACTGTCACCATGCAGAACGAGGAGGGT
genomic: GACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTG-CGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGT
EST: gi|33099857|gb|CF059817.1|CF059817
EST:     GCCGCCCGGGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCCG-CCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|32843698|gb|CD983379.1|CD983379
EST:     GCCGCCCGGGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCCG-CCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|211486991|gb|FL364169.1|FL364169
EST:     GCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|16927021|gb|BM080089.1|BM080089
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|211083956|gb|FL122196.1|FL122196
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGACCTGCCCAG                         TTGCTCTTTGAG-TAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGT
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTT-GCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGT
EST: gi|78026424|gb|DV494811.1|DV494811
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGACCTGCCCAG                         TTGCTCTTTG-AGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGT
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTC-TTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGT
EST: gi|18174789|gb|BM350177.1|BM350177
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|18171966|gb|BM347354.1|BM347354
EST:     CCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: CCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|67011099|gb|CO439848.1|CO439848
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|32843282|gb|CD982963.1|CD982963
EST:     GCCGCCCGGGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCCG-CCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|32843398|gb|CD983079.1|CD983079
EST:     GCCGCCCGGGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCCG-CCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|28910667|gb|CB331553.1|CB331553
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|32843439|gb|CD983120.1|CD983120
EST:     GCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|211083952|gb|FL122192.1|FL122192
EST:     AGCCGCCGCGCAGGTAGCCCCAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|211081223|gb|FL122183.1|FL122183
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGACCTGCCCAG                         TTGCTCTTTG-AGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGT
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTC-TTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGT
EST: gi|32843562|gb|CD983243.1|CD983243
EST:     GCCGCCCGGGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCCG-CCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|211091696|gb|FL353088.1|FL353088
EST:     GCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|33103940|gb|CF063900.1|CF063900
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|30087061|gb|CB885269.1|CB885269
EST:     GCCGCGCAGG-AGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAG-TCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|211078490|gb|FL122171.1|FL122171
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGACCTGCCCAG                         TTGCTCTTTG-AGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGT
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTC-TTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGT
EST: gi|211291611|gb|FL348657.1|FL348657
EST:     GCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|32843664|gb|CD983345.1|CD983345
EST:     AGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: AGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|32919371|gb|CF024183.1|CF024183
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|211133497|gb|FL122204.1|FL122204
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|211083951|gb|FL122191.1|FL122191
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCTGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|211083953|gb|FL122193.1|FL122193
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|211078493|gb|FL122174.1|FL122174
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGACCTGCCCAG                         TTGCTCTTTG-AGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGT
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTC-TTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGT
EST: gi|211083954|gb|FL122194.1|FL122194
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGACCTGCCCAG                         TTGCTCTTTG-AGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGT
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTC-TTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGT
EST: gi|32793079|gb|CD945315.1|CD945315
EST:     GATCTGCCCAG                         TTGCTCTTGCGGTAG-TCCCCCAACNTGTCACCATGCAGAACGAGGAGGGT
genomic: GATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAAC-TGTCACCATGCAGAACGAGGAGGGT
EST: gi|32912478|gb|CF017290.1|CF017290
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|32842936|gb|CD982617.1|CD982617
EST:     AGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: AGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|211486990|gb|FL364168.1|FL364168
EST:     GCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|211133499|gb|FL122206.1|FL122206
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGACCTGCCCAG                         TTGCTCTTTG-AGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGT
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTC-TTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGT
EST: gi|211007505|gb|FL346577.1|FL346577
EST:     GCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|8367895|gb|BE050840.1|BE050840
EST:     GCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|211081226|gb|FL122186.1|FL122186
EST:     TGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         CTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|32842892|gb|CD982573.1|CD982573
EST:     GCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|211083955|gb|FL122195.1|FL122195
EST:     GCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTACGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|33104321|gb|CF064281.1|CF064281
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGA-CAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|31355795|gb|CD440152.1|CD440152
EST:     GCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|32843212|gb|CD982893.1|CD982893
EST:     GCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCGCCATGCAGAACGAGGAGGGTA
genomic: GCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|211081222|gb|FL122182.1|FL122182
EST:     ATCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGACCTGCCCAG                         TTGCTCTTTG-AGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGT
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTC-TTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGT
EST: gi|32834170|gb|CD973848.1|CD973848
EST:     AGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: AGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|211359564|gb|FL446656.1|FL446656
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         CTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|211302561|gb|FL363192.1|FL363192
EST:     GCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|211081221|gb|FL122181.1|FL122181
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|18165012|gb|BM334851.1|BM334851
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|213182377|gb|FM181171.1|FM181171
EST:     GGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|30088160|gb|CB886365.1|CB886365
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|32843338|gb|CD983019.1|CD983019
EST:     GCCGCCCGGGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCCG-CCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|211081215|gb|FL122175.1|FL122175
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|211216507|gb|FL470816.1|FL470816
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|211083950|gb|FL122190.1|FL122190
EST:     AGCCGCCTTGCAGGTAGCCCTAGCACCCGCGACGAGCAGGACCTGCCCAG                         TTGCTCTTTG-AGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGT
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTC-TTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGT
EST: gi|32831416|gb|CD971094.1|CD971094
EST:     CGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: CGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|211083961|gb|FL122201.1|FL122201
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|17931052|gb|BM268012.1|BM268012
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGATCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|32842742|gb|CD982423.1|CD982423
EST:     GCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|211338083|gb|FL240078.1|FL240078
EST:     CCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAKAACGAGGAGGGTA
genomic: CCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|211534804|gb|FL337816.1|FL337816
EST:     GCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|32842901|gb|CD982582.1|CD982582
EST:     GCCGCCCGGGCAGGTAGCCCTAGCACCCGCGACGAGCATGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCCG-CCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|211393540|gb|FL318357.1|FL318357
EST:     GCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|40336239|gb|CK370309.1|CK370309
EST:     GCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCACAACTGTCAACATGCAGAACGAGGAGGGTA
genomic: GCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|30306523|gb|CD001196.1|CD001196
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|31356690|gb|CD441047.1|CD441047
EST:     GCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|18162184|gb|BM332023.1|BM332023
EST:     GCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGAT
genomic: GCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGG-T
EST: gi|32843401|gb|CD983082.1|CD983082
EST:     GCCGCCCGGGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCCG-CCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|32842980|gb|CD982661.1|CD982661
EST:     GCCGCCCGGGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCCG-CCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|30088304|gb|CB886509.1|CB886509
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|28986590|gb|CB351211.1|CB351211
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|18171086|gb|BM340926.1|BM340926
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|32842946|gb|CD982627.1|CD982627
EST:     GCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|32842953|gb|CD982634.1|CD982634
EST:     GCCGCCCGGGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCCG-CCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|9794730|gb|BE553038.1|BE553038
EST:     GGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCACAACTGTCAACATGCAGAACGAGGAGGGTA
genomic: GGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|211414388|gb|FL329260.1|FL329260
EST:     GCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|32830767|gb|CD970445.1|CD970445
EST:     CCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: CCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|211081228|gb|FL122188.1|FL122188
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGACCTGCCCAG                         TTGCTCTTTG-AGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGT
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTC-TTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGT
EST: gi|211083960|gb|FL122200.1|FL122200
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|30032046|gb|CB833897.1|CB833897
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
EST: gi|211083949|gb|FL122189.1|FL122189
EST:     AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGACCTGCCCAG                         TTGCTCTTTG-AGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGT
genomic: AGCCGCCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTC-TTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGT
EST: gi|32843482|gb|CD983163.1|CD983163
EST:     GCCGCCCGGGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAG                         TTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA
genomic: GCCG-CCGCGCAGGTAGCCCTAGCACCCGCGACGAGCAGGATCTGCCCAGgtaaatcgtc ... tgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tgcatagtgttgttctctttttatgtgcctgatagttggtcctcttgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTAAGACTGTGGACCTCTATGTCCCCAGGAAGTG
                          gcctgat  putative branch site (score: 4)
                                       tcctcttgtatttc  putative PPT
               tctttttat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtccatcaattttgaattgttacagtactgaatgagtcctcagagtgcatagtgttgttctctttttatgtgcctgatagttggtcctcttgtatttcagTTGCTCTTGCGGTAGTTCCCCCAACTGTCACCATGCAGAACGAGGAGGGTAAGACTGTGGACCTCTATGTCCCCAGGAAGTG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGGAG