1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtactccacccattttctccttcctgccgtgtgaaacccagcacccaaaccctaacttaaactgatcttatttaataacaaatgtatgaacatgtattatgcatactaactttttttattatagGGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCATCTAAATCCGGAGTTGCCAGCATTCGCTTGAGGTGCCGGACCACAGCAC
species | Zea mays |
transcript | GRMZM2G121942_T01 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCG-CAG GGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCAEST: gi|211191933|gb|FL276021.1|FL276021
genomic: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAGgtactccacc ... tttattatagGGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCA
EST: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAG GGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCAEST: gi|211191922|gb|FL276010.1|FL276010
genomic: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAGgtactccacc ... tttattatagGGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCA
EST: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAG GGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCAEST: gi|211191923|gb|FL276011.1|FL276011
genomic: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAGgtactccacc ... tttattatagGGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCA
EST: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAG GGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCAEST: gi|211088952|gb|FL225885.1|FL225885
genomic: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAGgtactccacc ... tttattatagGGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCA
EST: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAG GGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCAEST: gi|45847222|gb|CN071165.1|CN071165
genomic: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAGgtactccacc ... tttattatagGGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCA
EST: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAG GGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCAEST: gi|211191929|gb|FL276017.1|FL276017
genomic: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAGgtactccacc ... tttattatagGGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCA
EST: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAG GGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCAEST: gi|78111599|gb|DV529996.1|DV529996
genomic: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAGgtactccacc ... tttattatagGGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCA
EST: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAG GGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCAEST: gi|211191928|gb|FL276016.1|FL276016
genomic: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAGgtactccacc ... tttattatagGGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCA
EST: TCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAAG GGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCEST: gi|101402755|gb|EB822903.1|EB822903
genomic: TCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCC-AGgtactccacc ... tttattatagGGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGC
EST: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAG GGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCAEST: gi|211191930|gb|FL276018.1|FL276018
genomic: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAGgtactccacc ... tttattatagGGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCA
EST: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAG GGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCAEST: gi|149110102|gb|EE293919.2|EE293919
genomic: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAGgtactccacc ... tttattatagGGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCA
EST: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAG GGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCAEST: gi|211194322|gb|FL276024.1|FL276024
genomic: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAGgtactccacc ... tttattatagGGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCA
EST: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCHAG GGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCAEST: gi|211194323|gb|FL276025.1|FL276025
genomic: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAGgtactccacc ... tttattatagGGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCA
EST: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAG GGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCAEST: gi|32864255|gb|CF003937.1|CF003937
genomic: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAGgtactccacc ... tttattatagGGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCA
EST: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCCGCGGCGAGCACCGCCA- GGTGTGCATCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCAEST: gi|211191925|gb|FL276013.1|FL276013
genomic: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAGgtactccacc ... tttattatagGGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCA
EST: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAG GGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCAEST: gi|211194325|gb|FL276027.1|FL276027
genomic: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAGgtactccacc ... tttattatagGGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCA
EST: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAG GGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCAEST: gi|149076642|gb|EE165281.2|EE165281
genomic: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAGgtactccacc ... tttattatagGGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCA
EST: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAG GGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCAEST: gi|211194324|gb|FL276026.1|FL276026
genomic: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAGgtactccacc ... tttattatagGGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCA
EST: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAG GGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCAEST: gi|32943241|gb|CF048060.1|CF048060
genomic: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAGgtactccacc ... tttattatagGGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCA
EST: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCCGCGGCGAGCACCGCCA- GGTGTGCATCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCAEST: gi|60350040|gb|DN217013.1|DN217013
genomic: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAGgtactccacc ... tttattatagGGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCA
EST: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAG GGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCAEST: gi|211191934|gb|FL276022.1|FL276022
genomic: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAGgtactccacc ... tttattatagGGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCA
EST: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAG GGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCAEST: gi|211191924|gb|FL276012.1|FL276012
genomic: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAGgtactccacc ... tttattatagGGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCA
EST: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAG GGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCAEST: gi|211194321|gb|FL276023.1|FL276023
genomic: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAGgtactccacc ... tttattatagGGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCA
EST: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAG GGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCA
genomic: GTCTCCGTCAGACCCTTCGCCAGGTCTTCTTCGGCGGCGAGCACCGCCAGgtactccacc ... tttattatagGGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCA
atttaataacaaatgtatgaacatgtattatgcatactaactttttttattatagGGTGTGCACCCAATCTTCTTCACTGGGTCCTCCGCTGCTTCTAGTCACGCATCTAAATCCGGAGTTGCCAGCATTCGCTTGAGGTGCCGGACCACAGCAC
tactaac putative branch site (score: 186)
ctttttttatt CT-rich tract
tattatgcatactaac TA-rich tract