Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...tagtgtgctcgtcttcatagaatcatactactctgagttgcatcttgtgcagttccttctgttggtaatgagtattgactgctgccgcttgttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAGGGAAAGTTTTGGGAATATATCGAGGCGGAACTTTGAGGTGAGAATTCAC

Basic information

species Zea mays
transcript GRMZM2G108228_T01
intron # 1
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211310707|gb|FL362679.1|FL362679
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|71435980|gb|DR817030.1|DR817030
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|86470102|gb|DY236472.1|DY236472
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCAAAGATGTCTTTTCGGAGCGTGGTTCGTGATATAGG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|78116623|gb|DV535010.1|DV535010
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|89250696|gb|DY622482.1|DY622482
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|71318795|gb|DR796159.1|DR796159
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|71445229|gb|DR826279.1|DR826279
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|91049386|gb|EB159804.1|EB159804
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|50332914|gb|CO528040.1|CO528040
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|94479669|gb|EB708627.1|EB708627
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|8368052|gb|BE050997.1|BE050997
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATAT
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATAT
EST: gi|149074788|gb|EE163220.2|EE163220
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|71310262|gb|DR791424.1|DR791424
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|71765600|gb|DR963537.1|DR963537
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|76288559|gb|DV028127.1|DV028127
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|93015349|gb|EB640869.1|EB640869
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATTGGTTCGTGATATAA
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCAT-GGTTCGTGATATAA
EST: gi|148970343|gb|EE021209.2|EE021209
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|71441033|gb|DR822083.1|DR822083
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|149084543|gb|EE174011.2|EE174011
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|31611888|gb|CD568510.1|CD568510
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|148960184|gb|EE153436.2|EE153436
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|76021266|gb|DT948436.1|DT948436
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|78111619|gb|DV530016.1|DV530016
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|149090300|gb|EE179604.2|EE179604
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|71442832|gb|DR823882.1|DR823882
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|89249225|gb|DY621011.1|DY621011
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|71766358|gb|DR964295.1|DR964295
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|93283817|gb|EB676081.1|EB676081
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|74241058|gb|DT648972.1|DT648972
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|211422962|gb|FL360561.1|FL360561
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|148941245|gb|EC886139.2|EC886139
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|148940679|gb|EC885493.2|EC885493
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|50327951|gb|CO523077.1|CO523077
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|89759572|gb|DY688358.1|DY688358
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|211428128|gb|FL358025.1|FL358025
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|148959531|gb|EE010853.2|EE010853
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|78111743|gb|DV530140.1|DV530140
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|78123301|gb|DV541685.1|DV541685
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCAAAGATGTCTTTTCGGAGCATGGTTCGTGATATAGG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|50332231|gb|CO527357.1|CO527357
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|91049274|gb|EB159692.1|EB159692
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|78113977|gb|DV532366.1|DV532366
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|101387605|gb|EB815817.1|EB815817
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|211383375|gb|FL329680.1|FL329680
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGATCGTGATATAA
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAA
EST: gi|74236483|gb|DT644397.1|DT644397
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|71312297|gb|DR792672.1|DR792672
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|78079710|gb|DV508122.1|DV508122
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|149009205|gb|EE041318.2|EE041318
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|8368051|gb|BE050996.1|BE050996
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|91050137|gb|EB160555.1|EB160555
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|149082440|gb|EE171627.2|EE171627
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
EST: gi|91871229|gb|EB401309.1|EB401309
EST:     ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGG                         ACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG
genomic: ATCTTCTTCGACGAGGCTTCGATCTGCTGCTCTCCGTCGGCGTGTTGGGGgtaagcaagc ... gttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tgtgcagttccttctgttggtaatgagtattgactgctgccgcttgttatttcagACTTGCACCTTATCCGAAGATGTCTTTTCGGAGCATGGTTCGTGATATAAGGGAAAGTTTTGGGAATATATCGAGGCGGAACTTTGAGGTGAGAATTCAC
                           tattgac  putative branch site (score: 2)
                                              ttatttc  putative PPT
                                           ttgttattt  TA-rich tract