Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtacggccacctccctcgattcgattggctctaactacggaaccctaccctaggttcgatttgatctgtggattttgggggattttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG

Basic information

species Zea mays
transcript GRMZM2G102471_T05
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G102471_T04 (Zea mays), 3'ss of exon 1
lower sequence: LOC_Os04g57220.2 (Oryza sativa), 3'ss of exon 1
------------------gtacggccacctccctcgattcgattggctctaactacggaaccctaccctaggttc---gatttgatctgtggatt-ttgggggattttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG
                  |  |  |   ||| ||||||| ||| || |  | ||  ||  |||||   | | |     |||||  | | |   || ||  | |    || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
gtcggtacgcgtctctaggcccccctctctctctcgatttgatcggtttgatctgtggtgccctaggtttgatctgtggatttattttttttcttgttttgtgggggtgattagGGTTTGATCGATGGCGTCCAAGAGGATCCTGAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACCTCATGCAGCGCAG

upper sequence: GRMZM2G102471_T04 (Zea mays), 3'ss of exon 1
lower sequence: LOC_Os04g57220.1 (Oryza sativa), 3'ss of exon 1
--------------gtacggccacctccctcgattcgattggctctaactacggaaccctaccctaggttc---gatttgatctgtggatt-ttgggggattttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG
              |  |  |   ||| ||||||| ||| || |  | ||  ||  |||||   | | |     |||||  | | |   || ||  | |    || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
gtacgcgtctctaggcccccctctctctctcgatttgatcggtttgatctgtggtgccctaggtttgatctgtggatttattttttttcttgttttgtgggggtgattagGGTTTGATCGATGGCGTCCAAGAGGATCCTGAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACCTCATGCAGCGCAG

upper sequence: GRMZM2G102471_T04 (Zea mays), 3'ss of exon 1
lower sequence: Vv19s0015g01190.t01 (Vitis vinifera), 3'ss of exon 1
---------------------------gtacggccacctccctcgattcgattgg----ctctaactacggaaccctaccctaggttcgatttgat-ctgtggattttgggggattttgtttagGGTTTGATCGAT-------GGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG
                           ||  |    | |     ||   ||||       ||| |||   ||    |    |   | ||  ||| | | |      |      | | | || |   |||| || ||       ||| || ||| | ||    ||||||||||||||||||||||||||||| ||||| ||           
attttgcattgtctttctatggaacttgtttgatatcttatggagaagtgatttagttattcttactcttgacattttttatttatgcgtattgctgcagCACGAATCCTTCAACTGTATTGAAACTTTGGTCAATCTGTAATGGCTTCAAAGCGAATTAACAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTC-----------

upper sequence: GRMZM2G102471_T04 (Zea mays), 3'ss of exon 1
lower sequence: EDO98738 (Chlamydomonas reinhardtii), 3'ss of exon 1
gtacggccacctccctcgattcgattggctctaactacggaaccctaccctaggttcgat--ttgatctgtggattttgggggattttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGT----TGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG
    ||    |  |  | |  ||  | | |    ||  | |   | || | |||  | |   || |   | | || |     |    |||     | |  |  |     |  ||||      |  |    ||    ||  || ||||| |  |       |  || |  ||||     
----ggatgtcagcaaccagccgccttgttgaggctgtgtagaaccacgcgaggcccaacaattcagacgcgcatctgccccggccctgtcatccgctcaacagGACCTGCAGAAGGACCCGCCCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG-----

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211235968|gb|FL033340.1|FL033340
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211240449|gb|FL033371.1|FL033371
EST:     CGCTGCATCGACCCCGCGCCACCTNCGCCTGCMTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211340925|gb|FL033475.1|FL033475
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211238219|gb|FL033365.1|FL033365
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCYTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211242685|gb|FL033392.1|FL033392
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCSTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211251624|gb|FL033454.1|FL033454
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211343325|gb|FL033497.1|FL033497
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211238220|gb|FL033366.1|FL033366
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCSTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211340926|gb|FL033476.1|FL033476
EST:     CGCTGCATCGACCCCGCACCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211235970|gb|FL033342.1|FL033342
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|32915121|gb|CF019933.1|CF019933
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211244919|gb|FL033406.1|FL033406
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211247162|gb|FL033427.1|FL033427
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211251618|gb|FL033448.1|FL033448
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211343326|gb|FL033498.1|FL033498
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211338539|gb|FL033471.1|FL033471
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|8367043|gb|BE049988.1|BE049988
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211062662|gb|FL033335.1|FL033335
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCYTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|19057772|gb|BM736439.1|BM736439
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211343318|gb|FL033490.1|FL033490
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCSMCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211343322|gb|FL033494.1|FL033494
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCSTGCYTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|8367395|gb|BE050340.1|BE050340
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211340936|gb|FL033486.1|FL033486
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAANAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|87152240|gb|DY397029.1|DY397029
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211235980|gb|FL033352.1|FL033352
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211062665|gb|FL033338.1|FL033338
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTCGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGC
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTT-GATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGC
EST: gi|211338541|gb|FL033473.1|FL033473
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|15005359|gb|BI325426.1|BI325426
EST:     TCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: TCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211338533|gb|FL033465.1|FL033465
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211249388|gb|FL033433.1|FL033433
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACMTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211240460|gb|FL033382.1|FL033382
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCYTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211340931|gb|FL033481.1|FL033481
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211240462|gb|FL033384.1|FL033384
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211343332|gb|FL033504.1|FL033504
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211240450|gb|FL033372.1|FL033372
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211249394|gb|FL033439.1|FL033439
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCCTGAAGGAGCTGAAGG
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCC-TGAAGGAGTTGAAGG
EST: gi|211244923|gb|FL033410.1|FL033410
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211235972|gb|FL033344.1|FL033344
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211240448|gb|FL033370.1|FL033370
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211244927|gb|FL033414.1|FL033414
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211345710|gb|FL033505.1|FL033505
EST:     GCTGCATCGACCCGCGCGCCACCTCCGCCTGCSTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: GCTGCATCGACCC-CGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211340938|gb|FL033488.1|FL033488
EST:     CGCTGCATCGACCCCGCGCNACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211249398|gb|FL033443.1|FL033443
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211340929|gb|FL033479.1|FL033479
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211242691|gb|FL033398.1|FL033398
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211249393|gb|FL033438.1|FL033438
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|31628504|gb|CD526640.1|CD526640
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211343330|gb|FL033502.1|FL033502
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|6826976|gb|AW330619.1|AW330619
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GNTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211338540|gb|FL033472.1|FL033472
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211238218|gb|FL033364.1|FL033364
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCYTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211242690|gb|FL033397.1|FL033397
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211251615|gb|FL033445.1|FL033445
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCYTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211343321|gb|FL033493.1|FL033493
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGC
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGG-TTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGC
EST: gi|20301187|gb|BQ164130.1|BQ164130
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211249395|gb|FL033440.1|FL033440
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211240454|gb|FL033376.1|FL033376
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|31628261|gb|CD526521.1|CD526521
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211247156|gb|FL033421.1|FL033421
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211338538|gb|FL033470.1|FL033470
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211343319|gb|FL033491.1|FL033491
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211343323|gb|FL033495.1|FL033495
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCYTCCCCCGGCACCGATCG                         GGTTTRATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211238213|gb|FL033359.1|FL033359
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCSTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211343328|gb|FL033500.1|FL033500
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|18963462|gb|BM660448.1|BM660448
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|9794732|gb|BE553040.1|BE553040
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211343320|gb|FL033492.1|FL033492
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211251623|gb|FL033453.1|FL033453
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211240452|gb|FL033374.1|FL033374
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211235976|gb|FL033348.1|FL033348
EST:     CGCTGCATCGACCCCGCGCCACCYCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211235974|gb|FL033346.1|FL033346
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|14701145|gb|BI233563.1|BI233563
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|28987119|gb|CB351473.1|CB351473
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211340933|gb|FL033483.1|FL033483
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211340937|gb|FL033487.1|FL033487
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGNCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211247161|gb|FL033426.1|FL033426
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATG
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATG
EST: gi|211249387|gb|FL033432.1|FL033432
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCWGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211240455|gb|FL033377.1|FL033377
EST:     CGCTGCATCGACCCCGMRCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211238217|gb|FL033363.1|FL033363
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211240451|gb|FL033373.1|FL033373
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211340927|gb|FL033477.1|FL033477
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211340928|gb|FL033478.1|FL033478
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211343331|gb|FL033503.1|FL033503
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|78084134|gb|DV512527.1|DV512527
EST:     TGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: TGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211251617|gb|FL033447.1|FL033447
EST:     CGCTGCATCGACCCCGCGCCACCKSCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211242679|gb|FL033386.1|FL033386
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|30591287|gb|CD052297.1|CD052297
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211338542|gb|FL033474.1|FL033474
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|78105419|gb|DV523837.1|DV523837
EST:     TGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: TGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211340935|gb|FL033485.1|FL033485
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211240458|gb|FL033380.1|FL033380
EST:     CGCTGCATCGACCCCGCGCCACCSCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211247159|gb|FL033424.1|FL033424
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211244914|gb|FL033401.1|FL033401
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211249390|gb|FL033435.1|FL033435
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCBTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211247163|gb|FL033428.1|FL033428
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211238210|gb|FL033356.1|FL033356
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|20300917|gb|BQ163860.1|BQ163860
EST:     CGCTGCATCGACCCCGCGCCACCTCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211240456|gb|FL033378.1|FL033378
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211238214|gb|FL033360.1|FL033360
EST:     CGCTGCATCGACCCCGCGCCACCTCSGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
EST: gi|211247151|gb|FL033416.1|FL033416
EST:     CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCG                         GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA
genomic: CGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1278

TCCTCCCGTTCCGTCGCCGCCGCGCGCCTCGGAGAAGAGATAGAGGCGGCCGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 857

TCCTCCCGTTCCGTCGCCGCCGCGCGCCTCGGAGAAGAGATAGAGGCGGCCGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 749

TCCTCCCGTTCCGTCGCCGCCGCGCGCCTCGGAGAAGAGATAGAGGCGGCCGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1051

TCCTCCCGTTCCGTCGCCGCCGCGCGCCTCGGAGAAGAGATAGAGGCGGCCGCTGCATCGACCCCGCGCCACCCCCGCCTGCCTCCCCCGGCACCGATCGgtacggccac ... ttttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

cggaaccctaccctaggttcgatttgatctgtggattttgggggattttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG
                     atttgat  putative branch site (score: 1051)
                                             ttttgttt  putative PPT
                                            attttgttta  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtacggccacctccctcgattcgattggctctaactacggaaccctaccctaggttcgatttgatctgtggattttgggggattttgtttagGGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  CTGCAG