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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...taactgcggtgcagtgtagcagcttaatagcatgtatgttcttcacagtcaatatgaattgttaggtgtgatattctattcctgttactttttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGGCGAGGGTTATTGTTGCCATTGAGAACCCACAAGACATCATCGTCCAGTC

Basic information

species Zea mays
transcript GRMZM2G099657_T01
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G099657_T01 (Zea mays), 3'ss of exon 1
lower sequence: LOC_Os03g08440.2 (Oryza sativa), 3'ss of exon 1
taactgcggtgcagtgtagcagcttaatagcatgtatgtt-cttcacagtcaatatgaattgttaggtgtga-tattctattcctgttactttttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGGCGAGGGTTATTGTTGCCATTGAGAACCCACAAGACATCATCGTCCAGTC
     ||   |  |  | ||| | |  |   | ||||| | ||   |  |    | |   | ||   | ||| ||    |     ||| ||    ||   ||| ||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||| || |||||||| ||||||||
--gtggcatagttgcattgcaacctgttgcaaggtatgctgctgttcttttgggagggtatcttgaatatgaatacgtgaacatcgttgctgcaattcatagGTATCTACATCATCAACCTCGGCAAGACATGGGAGAAGCTGCAGCTCGCGGCGAGGGTGATTGTTGCCATTGAGAACCCCCAGGACATCATTGTCCAGTC

upper sequence: GRMZM2G099657_T01 (Zea mays), 3'ss of exon 1
lower sequence: GLYMA07G04890.1 (Glycine max), 3'ss of exon 1
-----------------------------------------taactgcggtgcagtgtagcagcttaatagca-tgtatgttcttcacagtcaatatgaattgtta------ggtgtgatattctattc-----------ctgttactttttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGGCGAGGGTTATTGTTGCCATTGAGAACCCACAAGACATCATCGTCCAGTC
                                         | ||    |     |  |  |  | |||  || || |||||  |   |  |   |  | |||| |      | | |||| ||  |||            ||||   ||||   || ||| || ||||| || ||||| || ||||| ||||| ||||| ||||| || || |||||||| ||||| ||||||||||| || || ||||| || || ||
gtaactaaaaccctagctcatcctctcttttcatcgatctctgacaatcgcatgttaaacaatttaaattccaatggatgtttgtttgaacctgcaatagttgtaatagacggatttgatttttgatttgctgtgttgtgctgtggattttggaattagGGATTTACATTATTAACCTTGGGAAGACGTGGGAGAAGCTTCAGCTAGCAGCTAGGGTTATAGTTGCAATTGAGAACCCCCAGGATATCATTGTTCAATC

upper sequence: GRMZM2G099657_T01 (Zea mays), 3'ss of exon 1
lower sequence: GLYMA08G17000.1 (Glycine max), 3'ss of exon 1
taactgcggtgcagtgtagcagcttaatagcatgtatgttcttcacagtcaatatgaattgttaggtgtgatattctattcctgttactt---tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGGCGAGGGTTATTGTTGCCATTGAGAACCCACAAGACATCATCGTCCAGTC
    |    |   ||   || | |||  |  || |    |    || |  |    ||  | || |   |  | ||  |||  |||   ||   ||||| ||||| || ||||| || ||||| || ||||||||||| ||||| ||||| || || ||| |||| || ||||||||||||||||| || |||||||| |||||
--tttttttttttgtaccgctg-ttatgaagatttcctcttgctactgaaatagagacattttggagtttttgttgaatttttgtggtttatgtttttttcagGTATTTACATAATTAACCTTGGAAAGACATGGGAGAAGCTTCAGCTTGCTGCTAGGATTATAGTCGCCATTGAGAACCCACAGGATATCATCGTTCAGTC

upper sequence: GRMZM2G099657_T01 (Zea mays), 3'ss of exon 1
lower sequence: GLYMA15G42150.1 (Glycine max), 3'ss of exon 1
taactgcggtgcagtgtagcagcttaatagcatgtatgttcttcacagtcaatatgaattgttaggtgtgat-attctattcctgttactttttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGGCGAGGGTTATTGTTGCCATTGAGAACCCACAAGACATCATCGTCCAGTC
    |  | |    || | |      || | | || |  ||||   | | ||   |||   || || ||  |  ||  |||  |||   || | || ||||| || ||||| || ||||| |||||||||||||| |||||||||||||| || ||| ||||||||||||||||||||||||| || ||||| || |||||
ggcgtttgcttttttgcaccgctaccat-gaaggtttcctcttgctactgaaatagaacattttggagtttttgttgaatttttgtggtttatgttttcagGTATTTACATAATTAACCTTGGCAAGACATGGGAGAAGCTCCAGCTCGCTGCTAGGATTATTGTTGCCATTGAGAACCCACAGGATATCATTGTTCAGTC

upper sequence: GRMZM2G099657_T01 (Zea mays), 3'ss of exon 1
lower sequence: GLYMA16G01460.1 (Glycine max), 3'ss of exon 1
------------------------------taactgcggtgcagtgtagcagcttaatagcatgtatg--ttcttcacagtcaatat----gaattg---ttaggtgtgatattctattcctgttactttttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGGCGAGGGTTATTGTTGCCATTGAGAACCCACAAGACATCATCGTCCAGTC
                              | |   || |  |       |  || |  | |||| ||  |     | ||     ||    ||||||   || | | |||| |  | |   | |   |||    || ||| || ||||| || ||||| || ||||||||||| ||||| ||| | || || |||||||||||||| ||||||||||| || || ||||| || || ||
gtaactgaacttttctcgttctctcttttatcatctcgttaaaaaaattaaatttcaatggatgtttgaatctgcaatagctgtaatagaggaattgaattttgatttgatttggtgtggtt-tggatttgggaattagGGATTTACATTATTAACCTTGGGAAGACATGGGAGAAGCTTCAGTTAGCAGCTAGGGTTATTGTTGCAATTGAGAACCCTCAGGATATCATTGTTCAATC

upper sequence: GRMZM2G099657_T01 (Zea mays), 3'ss of exon 1
lower sequence: AT1G72370.2 (Arabidopsis thaliana), 3'ss of exon 1
-taactgcggtgcagtgtagcagcttaatagcatgtatgttcttcacagtcaatatgaattgttaggtgtgatattctattcctgttactttttttat---cagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGGCGAGGGTTATTGTTGCCATTGAGAACCCACAAGACATCATCGTCCAGTC
 ||  || | |   ||||   |   |       |   |||  || ||| |       || || |  || ||  | |   ||  ||    |||  | ||   |||| || |||||| ||||||| ||||| |||||||| ||||||||| | || || || |||||||||||||||||||||||||| |||||||||||||||||
gtatttgtgctagtgtgtgttattgttgctcttttattgtaatttacaattgt----aagtggtgagtatggaacttagtttttgaagttttcgtcattctcagGTATTTACATCTTCAACCTTGGCAAAACATGGGAAAAGCTCCAGATGGCTGCTAGAGTTATTGTTGCCATTGAGAACCCACAGGACATCATCGTCCAGTC

upper sequence: GRMZM2G099657_T01 (Zea mays), 3'ss of exon 1
lower sequence: Vv09s0002g00610.t01 (Vitis vinifera), 3'ss of exon 1
taactgcggtgcagtgtagcagcttaatagcatgtatgttcttcacagtcaatatgaattgttaggtgtgatattcta----ttcctgttactttttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGGCGAGGGTTATTGTTGCCATTGAGAACCCACAAGACATCATCGTCCAGTC
 | |  | | | |   || ||   | ||   ||| ||| ||      ||  ||||||| || |       | ||| ||     |  |||   | |  | |||||| || |||||||||||||| || || |||||||| ||||| ||||| || || ||||| |||||||| |||||||||||  | |||||||| || |||||
-accatctgcggaaaataaca---tgatttgatggatgatcggttttgtagatatgaaatgattttgccaaaattttaagatcttttgtctttctaatgatcagGGATTTACATCATCAACCTTGGAAAAACATGGGAGAAGCTGCAGCTTGCAGCCAGGGTGATTGTTGCGATTGAGAACCCTAAGGACATCATTGTTCAGTC

upper sequence: GRMZM2G099657_T01 (Zea mays), 3'ss of exon 1
lower sequence: PP1S173_16V6.1 (Physcomitrella patens), 3'ss of exon 1
---------------------------------------------------------------------------------------------------taactgcggtgcagtgtagcagcttaatagcatgtatgttcttcacagtcaatatgaattgttaggtgtga-tattctattcctgttactttttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGGCGAGGGTTATTGTTGCCATTGAGAACCCACAAGACATCATCGTCCAGTC
                                                                                                          | | ||  ||      ||    |  ||||| |  ||   |       ||  |||    |  ||| |||| |      |    |   ||   |||| || | |||||| ||  |||| ||||| |  || |||||  |||| ||||||||||| |||| |||||| |||||||| || |||||||| || |||||
gtgagaactctgtcccctccattgtttgtcctcgtcccggtgtgttatcggtgtgggcttggggtgagaagtttctgtgttatgaatgataagggttcggggtgaagatacaa-gtttttttttggacgtgtgtatatgttttggacgggtcgtggtttggggtggttgactattgtggcttggcgggtccgttgcgcagGTATTTTCATCATTAATGTGGGAAAGACTTACGAGAAGCTGGAGCTGGCGGCGAGGGTGATTGCTGCCATCGAGAACCCTCAGGACATCATTGTGCAGTC

upper sequence: GRMZM2G099657_T01 (Zea mays), 3'ss of exon 1
lower sequence: PP1S209_48V6.1 (Physcomitrella patens), 3'ss of exon 1
----------------------------------------------------------------------taactgcggtg-cagtgtagcagcttaatagc--atgtatgttcttcacagtcaatatgaattgttaggtgtgatattctattcctgttactttttttat-cagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGGCGAGGGTTATTGTTGCCATTGAGAACCCACAAGACATCATCGTCCAGTC
                                                                      |   ||||| | | | |  |  | ||    ||  ||| |  |  ||              ||||    | ||  |    |  |  | ||| | | | |   ||||||| | |||||||||| |||||||||| |  || |||||  |||| || |||||||| |||| |||||| |||||||| || |||||||||||||||||
gtaattagggctttttccccctgtggcccgtgttggggtttggttgggtgcgtgtgcgagtgttcgttttttggtgcgggggcggcgcggggggtttggtgcggatggaattggtttgtgaaggtgggcgattgacgagggtagtggggtcgttgttttattctgtgtgggcagGCATTTTCATCATCAACGTGGGCAAGACCTACGAGAAGCTGGAGCTGGCCGCGAGGGTGATTGCTGCCATCGAGAACCCGCAGGACATCATCGTCCAGTC

upper sequence: GRMZM2G099657_T01 (Zea mays), 3'ss of exon 1
lower sequence: PP1S48_103V6.1 (Physcomitrella patens), 3'ss of exon 1
-------------------------------------------------------------taactgcggtgca---gtgtagcagcttaata-gcatgtatgttcttcacagtcaatatgaattgttaggtgtgatattctattcctgttactttttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGGCGAGGGTTATTGTTGCCATTGAGAACCCACAAGACATCATCGTCCAGTC
                                                                 |  |||||    | |  |  | ||  |  | | | | ||  ||     |         |||    | ||  |    |  |  | |   || | |   |||| || | |||||||||  |||||||||| |  || |||||  |||| || |||||||| |||| |||||| |||||||| || |||||||||||||||||
gtaattagggtttttcctcctgtggcccgttggggtttggttaggtgcttgtgcaagtgttcgtttttggtgcgagggcgcgggggtttggttcggagggaagtggtttgtgatagtgggctgttgacgagggtagtgacgtcgttttttattttgtgtgggcagGTATTTTCATCATCAATGTGGGCAAGACCTACGAAAAGCTGGAGCTGGCCGCGAGGGTGATTGCTGCCATCGAGAACCCCCAGGACATCATCGTCCAGTC

upper sequence: GRMZM2G099657_T01 (Zea mays), 3'ss of exon 1
lower sequence: EFJ32709 (Selaginella moellendorffii), 3'ss of exon 1
taactgcggtgcagtgtagcagcttaatagcatgtatgttcttcacagtcaatatgaattgttaggtgtgatattctattcctgttactttttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGGCGAGGGTTATTGTTGCCATTGAGAACCCACAAGACATCATCGTCCAGTC
                                                      | |  |  |||  |       | ||    | |   |  |    ||||||||| |||||||||  | || ||||| ||||| |||||||||||||||||  | || ||||| | ||| |||||||| || || |||||||| |||||
-----------------------------------------------------gtaagatcctagtcgcttctcgcgatcttagctttgtggtgccacagGCATCTTCATCATCAATGTCGGGAAGACGTGGGAGAAGCTCCAGCTCGCGGCCCGCGTGATTGTGGGCATCGAGAACCCCCACGATATCATCGTGCAGTC

upper sequence: GRMZM2G099657_T01 (Zea mays), 3'ss of exon 1
lower sequence: EFJ20712 (Selaginella moellendorffii), 3'ss of exon 1
taactgcggtgcagtgtagcagcttaatagcatgtatgttcttcacagtcaatatgaattgttaggtgtgatattctattcctgttactttttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGGCGAGGGTTATTGTTGCCATTGAGAACCCACAAGACATCATCGTCCAGTC
                                                      | |  |  |||  |       | ||    | |   |  |    ||||||||| |||||||||| | || ||||| ||||| |||||||||||||||||  | || ||||| | ||| |||||||| || || |||||||| |||||
-----------------------------------------------------gtaagatcctagtcgcttctcgcgatcttagctttgtggtgccacagGCATCTTCATCATCAACGTTGGGAAGACGTGGGAGAAGCTCCAGCTCGCGGCCCGCGTGATTGTGGGCATCGAGAACCCCCACGATATCATCGTGCAGTC

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211400876|gb|FL300023.1|FL300023
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|56382275|gb|CV984944.1|CV984944
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|148967244|gb|EE018445.2|EE018445
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|148999543|gb|EE036515.2|EE036515
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|211400874|gb|FL300021.1|FL300021
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|211400870|gb|FL300017.1|FL300017
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|32850450|gb|CD990131.1|CD990131
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|148953131|gb|EE152612.2|EE152612
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|148943861|gb|EC888941.2|EC888941
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|28910007|gb|CB331210.1|CB331210
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|19351054|gb|BM895586.1|BM895586
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|71446342|gb|DR827392.1|DR827392
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|149005055|gb|EE039580.2|EE039580
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|149110237|gb|EE190301.2|EE190301
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|211197207|gb|FL300008.1|FL300008
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|28987464|gb|CB351648.1|CB351648
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|27522059|gb|CA989165.1|CA989165
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|211197200|gb|FL300001.1|FL300001
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|211403420|gb|FL300033.1|FL300033
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|67010589|gb|CO439338.1|CO439338
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|211197211|gb|FL300012.1|FL300012
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|211197202|gb|FL300003.1|FL300003
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|211400869|gb|FL300016.1|FL300016
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|67010613|gb|CO439362.1|CO439362
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|27522024|gb|CA989130.1|CA989130
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|31359080|gb|CD443437.1|CD443437
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|67032609|gb|CO461358.1|CO461358
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|211400871|gb|FL300018.1|FL300018
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|211400875|gb|FL300022.1|FL300022
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|149089704|gb|EE178966.2|EE178966
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|148956831|gb|EC902738.2|EC902738
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|211400878|gb|FL300025.1|FL300025
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|5268560|gb|AI770524.1|AI770524
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|71431963|gb|DR813013.1|DR813013
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|31355946|gb|CD440303.1|CD440303
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|22935905|gb|BU572180.1|BU572180
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|30306903|gb|CD001576.1|CD001576
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|23357479|gb|BU645128.1|BU645128
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|71448210|gb|DR829260.1|DR829260
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|9028567|gb|BE238607.1|BE238607
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|148946516|gb|EC891828.2|EC891828
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|211403421|gb|FL300034.1|FL300034
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|148956964|gb|EC902906.2|EC902906
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|31363450|gb|CD447807.1|CD447807
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|211197205|gb|FL300006.1|FL300006
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|78082756|gb|DV511149.1|DV511149
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|148933816|gb|EC877767.2|EC877767
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|67035411|gb|CO463944.1|CO463944
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|211197201|gb|FL300002.1|FL300002
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|67026689|gb|CO455438.1|CO455438
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|8368938|gb|BE051883.1|BE051883
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|67031238|gb|CO459987.1|CO459987
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|60341245|gb|DN208218.1|DN208218
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|67034831|gb|CO463364.1|CO463364
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|149060857|gb|EE157310.2|EE157310
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|116828171|gb|EC872137.1|EC872137
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|19436142|gb|BM952552.1|BM952552
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|211403417|gb|FL300030.1|FL300030
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|18648830|gb|BM497649.1|BM497649
EST:     GATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|28909492|gb|CB331844.1|CB331844
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|148960810|gb|EE011477.2|EE011477
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|29947038|gb|CB816451.1|CB816451
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|211400882|gb|FL300029.1|FL300029
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGAC-Ggtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCG
EST: gi|148937803|gb|EC882018.2|EC882018
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|211400872|gb|FL300019.1|FL300019
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|76019320|gb|DT946490.1|DT946490
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|211197212|gb|FL300013.1|FL300013
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|71442804|gb|DR823854.1|DR823854
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|148973477|gb|EE024575.2|EE024575
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|67017288|gb|CO446037.1|CO446037
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|18965031|gb|BM661353.1|BM661353
EST:     AAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: -AACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|211400881|gb|FL300028.1|FL300028
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|149001171|gb|EE038436.2|EE038436
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|19350777|gb|BM895309.1|BM895309
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|29947085|gb|CB816474.1|CB816474
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|14883581|gb|BI273430.1|BI273430
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
EST: gi|211197206|gb|FL300007.1|FL300007
EST:     GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACG                         GCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG
genomic: GAACTGCGATTTCCAGATGGAGCGGTATGTCTTTAAGCGTCGCACCGACGgtatgttctt ... tttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

cagtcaatatgaattgttaggtgtgatattctattcctgttactttttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGGCGAGGGTTATTGTTGCCATTGAGAACCCACAAGACATCATCGTCCAGTC
                            ttctattcctgttact  CT-rich tract
                                     tgttactttttttat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
taactgcggtgcagtgtagcagcttaatagcatgtatgttcttcacagtcaatatgaattgttaggtgtgatattctattcctgttactttttttatcagGCATCTACATCATCAACCTGGGCAAGACATGGGATAAGCTCCAGCTCGCGGCGAGGGTTATTGTTGCCATTGAGAACCCACAAGACATCATCGTCCAGTC

- - - -ggtgcag
- - - - - - - - - gcagctt
- - - - - - - - - - - - - - -gcatgta
- - - - - - - - - - - - - - - - - - - - cttcaca
- - - - - - - - - - - - - - - - - - - - - - - - - - - tgaattg