Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagtccgtctccccagtcctttttagcttcctttcccacggtgatctggttgtcgctatcggtcgcgcggtttcgatgcgatcgcggcctcgtgggtttgctctggctgatcagtgttcgtttggtttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG

Basic information

species Zea mays
transcript GRMZM2G094712_T02
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G094712_T04 (Zea mays), 3'ss of exon 1
lower sequence: LOC_Os01g55540.2 (Oryza sativa), 3'ss of exon 1
gtaagtccgtctccccagtcctttttagcttcctttcccacggtgatctggttgtcgctatcggtcgcgcggtttcgatgcgatcgcggcctcgtgggtttgctctggctgatcagtgttcgt-ttggtttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG
|||||  |  |  | |      |   |   ||  | ||       |||  | ||||   | ||||  ||  |    ||| ||  |||||  |  |||||| ||||   |||||| ||| ||   ||||| |   || ||||||| || || |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
gtaagatccccctctcg---tctcccaatctcactcccgctccccatc--gctgtcttcaccggtttcg--gccgtgat-cg--cgcggttttttgggttcgctcgacctgatcggtgctcccgttggtgttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGCGTCGGCGCCTACCGGACCGAG
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211351968|gb|FL217074.1|FL217074
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|51592836|gb|CV071982.1|CV071982
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|15323595|gb|BI478852.1|BI478852
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCATGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|47961783|gb|CN844492.1|CN844492
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|211211706|gb|FL374152.1|FL374152
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|31357714|gb|CD442071.1|CD442071
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|51592763|gb|CV071909.1|CV071909
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|211266228|gb|FL159045.1|FL159045
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|18053152|gb|BM318810.1|BM318810
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCATGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|211014760|gb|FL416055.1|FL416055
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|18385028|gb|BM418227.1|BM418227
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCATGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|211443956|gb|FL410276.1|FL410276
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|18385008|gb|BM418207.1|BM418207
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCATGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|211099665|gb|FL378492.1|FL378492
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|51593002|gb|CV072148.1|CV072148
EST:     GGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: GGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|62550538|gb|DN830958.1|DN830958
EST:     CTCCGTCTTCGCCGCACTCGAGCAGGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CTCCGTCTTCGCCGCACTCGAGCA-GGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|58029674|gb|CX725101.1|CX725101
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|20803254|gb|BQ294304.1|BQ294304
EST:     CTCCGTCTTCGCCGCACTCGAGTCATGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CTCCGTCTTCGCCGCACTCGAG-CAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|33942552|gb|CF349152.1|CF349152
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|108953678|gb|EC364837.1|EC364837
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|58029769|gb|CX725196.1|CX725196
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|44681683|gb|CK786731.1|CK786731
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|47962228|gb|CN844937.1|CN844937
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|67024299|gb|CO453048.1|CO453048
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|211144698|gb|FL413095.1|FL413095
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|47961407|gb|CN844116.1|CN844116
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|108954266|gb|EC365083.1|EC365083
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|94476203|gb|EB705161.1|EB705161
EST:     CCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|15188202|gb|BI417179.1|BI417179
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCATGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|31353308|gb|CD437665.1|CD437665
EST:     TTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGCT                         CTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: TTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|149014131|gb|EE043672.2|EE043672
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|108953108|gb|EC364589.1|EC364589
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|62550494|gb|DN830914.1|DN830914
EST:     GCCCCGGATGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: GCCCCGGA-GGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|6020876|gb|AW065804.1|AW065804
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|211323634|gb|FL399609.1|FL399609
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|47961406|gb|CN844115.1|CN844115
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|109637234|gb|EC590779.1|EC590779
EST:     CCCCATCCTCGGA                         G
genomic: CCCCATCCTCGGAgtaagtccgt ... ttctgggcag-
EST: gi|109637234|gb|EC590779.1|EC590779
EST:     CCCCATCCTCGGA                         G
genomic: CCCCATCCTCGGAgtaagtccgt ... ttctgggcag-
EST: gi|31356983|gb|CD441340.1|CD441340
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|62550589|gb|DN831009.1|DN831009
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|211041751|gb|FL371252.1|FL371252
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|211199749|gb|FL411771.1|FL411771
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|211432198|gb|FL427261.1|FL427261
EST:     CCTCCGTCTTCGCCGCACTCGAGCRGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|211493670|gb|FL398960.1|FL398960
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|33100620|gb|CF060580.1|CF060580
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|26456907|gb|CA828490.1|CA828490
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|45213782|gb|CK850009.1|CK850009
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|20507973|gb|BQ279845.1|BQ279845
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|47961457|gb|CN844166.1|CN844166
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCCTCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGATCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|38502508|gb|CF972368.1|CF972368
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|211504654|gb|FL412020.1|FL412020
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|211449902|gb|FL391246.1|FL391246
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|18383833|gb|BM417033.1|BM417033
EST:     GTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCATGAAGGTCAACCTCGGG
genomic: GTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|44682191|gb|CK787239.1|CK787239
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|15323594|gb|BI478851.1|BI478851
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCATGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|211535952|gb|FL381085.1|FL381085
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|148986993|gb|EE030811.2|EE030811
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|31250263|gb|CD219287.1|CD219287
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|211296653|gb|FL387902.1|FL387902
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|213184108|gb|FM191702.1|FM191702
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|149108013|gb|EE292368.2|EE292368
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|211313595|gb|FL415828.1|FL415828
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|9731418|gb|BE510170.1|BE510170
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|111433992|gb|EE298061.1|EE298061
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|111145728|gb|EE258080.1|EE258080
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|211289848|gb|FL370551.1|FL370551
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|31351488|gb|CD435845.1|CD435845
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|16137336|gb|BI894201.1|BI894201
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCATGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|211029227|gb|FL368599.1|FL368599
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|148940851|gb|EC885683.2|EC885683
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|61119383|gb|DN560344.1|DN560344
EST:     CAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|148941397|gb|EC886314.2|EC886314
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|211493669|gb|FL398959.1|FL398959
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|31358307|gb|CD442664.1|CD442664
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|211039937|gb|FL415152.1|FL415152
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|31250213|gb|CD219237.1|CD219237
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|9255298|gb|BE345766.1|BE345766
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|211130248|gb|FL407379.1|FL407379
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|47961719|gb|CN844428.1|CN844428
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|108823876|gb|EC277884.1|EC277884
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|9255430|gb|BE345898.1|BE345898
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|211159439|gb|FL370490.1|FL370490
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|9461770|gb|BE453896.1|BE453896
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|62525922|gb|DN828570.1|DN828570
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|149065671|gb|EE286793.2|EE286793
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|16137337|gb|BI894202.1|BI894202
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCATGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|9794571|gb|BE552879.1|BE552879
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|109637534|gb|EC591079.1|EC591079
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|211060007|gb|FL387699.1|FL387699
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|51592747|gb|CV071893.1|CV071893
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|211363355|gb|FL393791.1|FL393791
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|60672637|gb|DN475335.1|DN475335
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|40485897|gb|CK394794.1|CK394794
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|211266269|gb|FL388730.1|FL388730
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
EST: gi|211245085|gb|FL389172.1|FL389172
EST:     CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGA                         GTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG
genomic: CCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 249

CTCCGCCACCTCCACCCTCGAATCGTTCCCCACCATGGCGTCGCAGGGATCCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 452

CTCCGCCACCTCCACCCTCGAATCGTTCCCCACCATGGCGTCGCAGGGATCCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG


Block sizes: 48 (upstream exon), 49 (downstream exon)
Score: 245

CTCCGCCACCTCCACCCTCGAATCGTTCCCCACCATGGCGTCGCAGGGATCCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 438

CTCCGCCACCTCCACCCTCGAATCGTTCCCCACCATGGCGTCGCAGGGATCCTCCGTCTTCGCCGCACTCGAGCAGGCCCCGGAGGACCCCATCCTCGGAgtaagtccgt ... ttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tcgcggcctcgtgggtttgctctggctgatcagtgttcgtttggtttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG
                       ggctgat  putative branch site (score: 438)
                                            tttct  putative PPT