1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
gtcgccccctctctctctttcccctgtcccgtccaatcctttctctcctctaaaaccctaatccccgaaccctccctttccgccgcagTCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAGGGCTTGGGGGTTTTTTCCACCGCCGCCCCCGAGCCGGGCTCCAACGACG
species | Zea mays |
transcript | GRMZM2G078458_T05 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAG TCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAGEST: gi|94477458|gb|EB706416.1|EB706416
genomic: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAGgtcgccccct ... tccgccgcagTCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAG
EST: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAG TCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAGEST: gi|148953147|gb|EE152628.2|EE152628
genomic: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAGgtcgccccct ... tccgccgcagTCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAG
EST: GCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAG TCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAGEST: gi|149072634|gb|EE160863.2|EE160863
genomic: GCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAGgtcgccccct ... tccgccgcagTCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAG
EST: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAG TCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAGEST: gi|149112477|gb|EE295347.2|EE295347
genomic: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAGgtcgccccct ... tccgccgcagTCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAG
EST: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAG TCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAGEST: gi|91050911|gb|EB161329.1|EB161329
genomic: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAGgtcgccccct ... tccgccgcagTCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAG
EST: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAG TCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAGEST: gi|76928343|gb|DV171591.1|DV171591
genomic: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAGgtcgccccct ... tccgccgcagTCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAG
EST: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAG TCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAG
genomic: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAGgtcgccccct ... tccgccgcagTCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAG
caatcctttctctcctctaaaaccctaatccccgaaccctccctttccgccgcagTCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAGGGCTTGGGGGTTTTTTCCACCGCCGCCCCCGAGCCGGGCTCCAACGACG
ccctaat putative branch site (score: 26)
ccctccctttccgccg putative PPT
tctaaaa TA-rich tract