1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
gtcgccccctctctctctttcccctgtcccgtccaatcctttctctcctctaaaaccctaatccccgaaccctccctttccgccgcagTCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAGGGCTTGGGGGTTTTTTCCACCGCCGCCCCCGAGCCGGGCTCCAACGACG
species | Zea mays |
transcript | GRMZM2G078458_T02 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAG TCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAGEST: gi|211047245|gb|FL354513.1|FL354513
genomic: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAGgtcgccccct ... tccgccgcagTCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAG
EST: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAG TCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAGEST: gi|71766035|gb|DR963972.1|DR963972
genomic: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAGgtcgccccct ... tccgccgcagTCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAG
EST: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAG TCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAGEST: gi|78108131|gb|DV526549.1|DV526549
genomic: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAGgtcgccccct ... tccgccgcagTCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAG
EST: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAG TCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAGEST: gi|101383848|gb|EB813979.1|EB813979
genomic: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAGgtcgccccct ... tccgccgcagTCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAG
EST: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAG TCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAGEST: gi|211096929|gb|FL366862.1|FL366862
genomic: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAGgtcgccccct ... tccgccgcagTCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAG
EST: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAG TCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAGEST: gi|71319933|gb|DR796728.1|DR796728
genomic: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAGgtcgccccct ... tccgccgcagTCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAG
EST: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAG TCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAGEST: gi|148973503|gb|EE024603.2|EE024603
genomic: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAGgtcgccccct ... tccgccgcagTCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAG
EST: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAG TCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAGEST: gi|74241324|gb|DT649238.1|DT649238
genomic: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAGgtcgccccct ... tccgccgcagTCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAG
EST: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAG TCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAGEST: gi|71330009|gb|DR801742.1|DR801742
genomic: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAGgtcgccccct ... tccgccgcagTCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAG
EST: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAG TCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAGEST: gi|37421956|gb|CF648682.1|CF648682
genomic: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAGgtcgccccct ... tccgccgcagTCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAG
EST: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAG TCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAG
genomic: CCGCTGCCGACGACGATGTCAAGCTCGAATCCTTCCTCCAATGGCTCCAGgtcgccccct ... tccgccgcagTCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAG
caatcctttctctcctctaaaaccctaatccccgaaccctccctttccgccgcagTCCAACGGCGCCGACCTCCGCAGCTGCACGATCCGCGCATGCGGCGGCAAGGGCTTGGGGGTTTTTTCCACCGCCGCCCCCGAGCCGGGCTCCAACGACG
ccctaat putative branch site (score: 11)
ccctccctttccgccg putative PPT
tctaaaa TA-rich tract