Sequence
atgc intronic sequence ATGC exonic sequence...cagctcagcaccaaggcacgacgcaactgcagcaacatcggcgtcgcgcagatcgtcgccgccgcgtggtccgactgcctcgctgctcgcccccaatcagGCGGCGGCGGATGTCAGCGCAATTCCTAACGCTAAGGTTGCGCAGCCGTCCGCCGTCGTATTGGCCGAGCGTAACCTGCTCGGCTCCGACGCCAGCCTCG
Basic information
Orthologous splice sites
atgc intronic sequence ATGC exonic sequence
upper sequence: GRMZM2G075153_T03 (Zea mays), 3'ss of exon 1
lower sequence: LOC_Os03g25940.4 (Oryza sativa), 3'ss of exon 1
cagctcagcaccaaggcacgacgcaactgcagcaacatcggcgtcgcgcagatcgtcgccgccgcgtggtccgactgcctcgctgctcgcccccaatcagGCGGCGGCGGATGTCAGCGCAATTCCTAACGCTAAGGTTGCGCAGCCGTCCGCCGTCGTATTGGCCGAGCGTAACCTGCTCGGCTCCGACGCCAGCCTCG
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nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntggagGCCACGGCCGAGGTTGGCGCCATCCCCAACGCCAAGCTCGGCCAGCCGTCCGCCGCCGCATTGGCCGAGCAGGCCCTGCTCGGTTCAGACGCCAGCCTCGMapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|38229609|gb|CF919922.1|CF919922EST: CTCCACCTCCTCGAAGCCGCCGCGACCGATCGAGCGAAGCGTCCCTTCCC GCGGCGGCGGATGTCAGCGCAATTCCTAACGCTAAGGTTGCGCAGCCGTCC
genomic: CTCCACCTCCTCGAAGCCGCCGCGACCGAACGAGCGAAGCGTCCCTTCCCgcgccgacgc ... ccccaatcagGCGGCGGCGGATGTCAGCGCAATTCCTAACGCTAAGGTTGCGCAGCCGTCC
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.gcgcagatcgtcgccgccgcgtggtccgactgcctcgctgctcgcccccaatcagGCGGCGGCGGATGTCAGCGCAATTCCTAACGCTAAGGTTGCGCAGCCGTCCGCCGTCGTATTGGCCGAGCGTAACCTGCTCGGCTCCGACGCCAGCCTCG
ctcgccccc CT-rich tract