1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
...tgttactgattttccaggttttgtatttgcatagctgcattgtcaaatgtacatatgaattcttctgattttctttatttggtttgtgtgaattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
species | Zea mays |
transcript | GRMZM2G074898_T01 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|211346388|gb|FL410657.1|FL410657
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: CTACGGCCGCCACCATCGCCTCTCTGACCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|60340680|gb|DN207653.1|DN207653
genomic: CTACGGCCGCCACCATCGCCTCGC-GGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|17970253|gb|BM277016.1|BM277016
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|211343699|gb|FL394269.1|FL394269
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|40334938|gb|CK369008.1|CK369008
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGCGACCGCCTGCCGCTCCGCTCGAAAG TTTTTACTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|211455841|gb|FL371243.1|FL371243
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGSGGCCGCCTGCCGCTCCGCTCGAAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|60357584|gb|DN224557.1|DN224557
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|32912748|gb|CF017560.1|CF017560
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACCGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGGAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|32912550|gb|CF017362.1|CF017362
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACCGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGGAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|211518470|gb|FL391754.1|FL391754
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|211081823|gb|FL380750.1|FL380750
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|211275568|gb|FL307670.1|FL307670
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: GCCTGCCGCTCCGCTCGGAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTTAAEST: gi|5439460|gb|AI820381.1|AI820381
genomic: GCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: GCCACCATCGCCTCGCGACCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|211151698|gb|FL395044.1|FL395044
genomic: GCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACCGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGGAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|211057427|gb|FL405183.1|FL405183
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACCGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGGAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|33466891|gb|CF243940.1|CF243940
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|32916299|gb|CF021111.1|CF021111
genomic: TGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACCGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGGAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|211423511|gb|FL387507.1|FL387507
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGCGACCGCYTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|32857944|gb|CD997625.1|CD997625
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACCGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGGAAG TTTTTGGTGAAGA-TTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|60400075|gb|DN232882.1|DN232882
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: CGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|61117725|gb|DN558686.1|DN558686
genomic: CGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: CATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGGAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|60338406|gb|DN205379.1|DN205379
genomic: CATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: CCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|32916287|gb|CF021099.1|CF021099
genomic: CCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACCGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGGAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|211205227|gb|FL427932.1|FL427932
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACCGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGGAAG TTTTTGGTGAAGATTTTTTGAAGCKGAGAAGATGGTGCTGAAEST: gi|211397511|gb|FL028518.1|FL028518
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACCGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGGAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|60346777|gb|DN213750.1|DN213750
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: CCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|211349078|gb|FL422792.1|FL422792
genomic: CCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGCGACCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|27575952|gb|CA998646.1|CA998646
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|9255288|gb|BE345756.1|BE345756
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: CACCATCGCCTCGCGACCGCCTGCCGCTCCGCTCGAAAG -TTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|60340046|gb|DN207019.1|DN207019
genomic: CACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: GCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|211533526|gb|FL409955.1|FL409955
genomic: GCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|60358293|gb|DN225266.1|DN225266
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: CACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGANNNNNNNGAAGCCGAGAAGATGGTGCTGAAEST: gi|60339236|gb|DN206209.1|DN206209
genomic: CACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGA-TTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|211539244|gb|FL396305.1|FL396305
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGCGACCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|211501617|gb|FL378298.1|FL378298
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACCGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGGAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|61117724|gb|DN558685.1|DN558685
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: GCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGGAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|32907841|gb|CF012654.1|CF012654
genomic: GCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACCGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGGAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|32858207|gb|CD997888.1|CD997888
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACCGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGGAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|26557169|gb|CA829404.1|CA829404
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|211449456|gb|FL371664.1|FL371664
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGCGACCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|32907015|gb|CF011828.1|CF011828
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACCGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGGAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|211202123|gb|FL177996.1|FL177996
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|30306809|gb|CD001482.1|CD001482
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGCGG-CGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|86856126|gb|DY307137.1|DY307137
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: CGCCTCGCGGCCGCCTGCCGCTCCGCTCGGAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|32912214|gb|CF017026.1|CF017026
genomic: CGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACCGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGGAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|60344841|gb|DN211814.1|DN211814
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: GCCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|22546116|gb|BU098437.1|BU098437
genomic: GCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: CTACGGCCGCCACCATCCTCTTCGCGACCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|211156590|gb|FL395424.1|FL395424
genomic: CTACGGCCGCCACCAT-CGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGCGACCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|32916277|gb|CF021089.1|CF021089
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACCGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGGAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|19351218|gb|BM895750.1|BM895750
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCG-GGCCGCCTGCCGCTCCGCTCG-AAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|22489414|gb|BU049337.1|BU049337
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|60401467|gb|DN234274.1|DN234274
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: GCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|211157838|gb|FL370476.1|FL370476
genomic: GCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACCGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGGAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|211202120|gb|FL177993.1|FL177993
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGNGACCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|19350583|gb|BM895115.1|BM895115
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|211520879|gb|FL379231.1|FL379231
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|9255420|gb|BE345888.1|BE345888
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGCGACCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|211415704|gb|FL382754.1|FL382754
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|113702770|gb|EE680274.1|EE680274
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: CTACGGCCGCCACCATCGCCTCGCGACCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|211429599|gb|FL427249.1|FL427249
genomic: CTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGCGACCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|61117723|gb|DN558684.1|DN558684
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACCGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGGAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|32863688|gb|CF003370.1|CF003370
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACCGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGGAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|60346696|gb|DN213669.1|DN213669
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: CCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|28931314|gb|CB334675.1|CB334675
genomic: CCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: CTCGCGGCCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|88758546|gb|DY542915.1|DY542915
genomic: CTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|29946890|gb|CB816375.1|CB816375
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAG TTTTTAG-GAAGATTTTTTGAAGCCGAGAAGATGG-GCTGAAEST: gi|30088005|gb|CB886210.1|CB886210
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: CCACCATCGCCTCGCGG-CGCCTGCCGCTCCGCTCGAAAG -TTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGG-GCTGAAEST: gi|32909393|gb|CF014205.1|CF014205
genomic: CCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACCGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGGAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|33091237|gb|CF051231.1|CF051231
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACCGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGGAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|5018398|gb|AI714591.1|AI714591
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: CCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|32912830|gb|CF017642.1|CF017642
genomic: CCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACCGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGGAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|60394206|gb|DN227076.1|DN227076
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: CGGCCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|32908151|gb|CF012964.1|CF012964
genomic: CGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACCGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGGAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|86470312|gb|DY236682.1|DY236682
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: CTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|120480973|gb|EH211102.1|EH211102
genomic: CTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|211103186|gb|FL427059.1|FL427059
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACCGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGGAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|211085458|gb|FL413527.1|FL413527
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: CTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCTCGCTCCGCTCGAAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|20300626|gb|BQ163569.1|BQ163569
genomic: CTACGGCCGCCACCATCGCCTCGCGGCCGCCTGC-CGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|211379540|gb|FL395178.1|FL395178
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAG TTTTTGGTGAAGATTTTTTGAAGCTGAGAAGATGGTGCTGAAEST: gi|211408570|gb|FL414978.1|FL414978
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: TCTACGGCCGCCACCATCGCCTCGCGACCGCTTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGRGAAGATGGTGCTGAAEST: gi|9028630|gb|BE238670.1|BE238670
genomic: TCTACGGCCGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: GCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAAEST: gi|113703310|gb|EE680814.1|EE680814
genomic: GCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
EST: CGCCACCATCGCCTCGCGACCGCCTGCCGCTCCGCTCGAAAG TTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
genomic: CGCCACCATCGCCTCGCGGCCGCCTGCCGCTCCGCTCGAAAGgtgtggcaac ... aattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
aatgtacatatgaattcttctgattttctttatttggtttgtgtgaattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
ttctgat putative branch site (score: 2939)
tgattttctttattt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| tgttactgattttccaggttttgtatttgcatagctgcattgtcaaatgtacatatgaattcttctgattttctttatttggtttgtgtgaattacacagTTTTTAGTGAAGATTTTTTGAAGCCGAGAAGATGGTGCTGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG
tgttact
- - - - - - - - - - - - -tttgcat
- - - - - - - - - - - - - - - - -gctgcat