Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...acctgcacattcaaatccagtgtttcttttcaatcacatagtgaactaaaacactctcatcactcagtgatatttgattttatccacatgccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACCGGAATGGTCAAG

Basic information

species Zea mays
transcript GRMZM2G067985_T02
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G067985_T02 (Zea mays), 3'ss of exon 1
lower sequence: LOC_Os05g01600.2 (Oryza sativa), 3'ss of exon 1
acctgcacattcaaatccagtgtttcttttcaatcacatagtgaactaaaacactctcatcactcagtgatatttgattttatccacatgccacttgcagCAGTTCTGTAG-AAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACCGGAATGGTCAAG
        ||| |  |  ||   | | |     ||   | ||  |  || |     | ||||  || |  || |||  || |   |    |    ||||||  |||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||
-----atgatttagttgaagaaatgcgtcgtcgtcgagttgtatagcaacaa----tgatcaggcactactacttg--ttaaagtattaactctctgcagctcttctgtagGAAATGGCTGACGGTGAGGACATCCAGCCTCTTGTCTGTGACAATGGCACTGGAATGGTCAAG

upper sequence: GRMZM2G067985_T02 (Zea mays), 3'ss of exon 1
lower sequence: LOC_Os05g01600.1 (Oryza sativa), 3'ss of exon 1
-------acctgcacattcaaatccagtgtttcttttcaatcacatagtgaactaaaacactctcatcactcagtgatatttgattttatccacatgccacttgcagCAGTTCTGTAG-AAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACCGGAATGGTCAAG
       | |     ||| |  |  ||   | | |     ||   | ||  |  || |     | ||||  || |  || |||  || |   |    |    ||||||  |||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||
agtactcatcaatg-atttagttgaagaaatgcgtcgtcgtcgagttgtatagcaacaa----tgatcaggcactactacttg--ttaaagtattaactctctgcagCTCTTCTGTAGGAAATGGCTGACGGTGAGGACATCCAGCCTCTTGTCTGTGACAATGGCACTGGAATGGTCAAG

upper sequence: GRMZM2G067985_T02 (Zea mays), 3'ss of exon 1
lower sequence: AT5G09810.1 (Arabidopsis thaliana), 3'ss of exon 1
acctgcacattcaaatccagtgtttcttttcaatcacatagtgaactaaaacactctcatcactcagtgatatttgattttatccacatgccacttgcagCAGTTCTGT--AGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACCGGAATGGTCAAG
            |||  | |    ||||   ||  |  | |||| || |  |    | |   |       |||   |||   | |   | |   || |     || |    | ||||||| ||||||||||| || ||||| |||||||| |||||||| || |||||||| |||
---------aataaacgctgctaatcttcgaaactaagttgtgatctgattcgtgtttacttcatgagcttatccaattcatttcggtttcattttactttttttttagTGAAAAATGGCCGATGGTGAGGATATTCAGCCACTTGTCTGTGACAATGGAACTGGAATGGTGAAG

upper sequence: GRMZM2G067985_T02 (Zea mays), 3'ss of exon 1
lower sequence: PP1S372_38V6.1 (Physcomitrella patens), 3'ss of exon 1
---------------------acctgcac---attcaaatccagtgtttcttttcaatcacatagtgaactaaaacactctcatcactcagtgatatttgattttatccacatgccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACCGGAATGGTCAAG
                     ||| | ||     |||  |  | ||||    | |  |   ||| |  |  |||  |  |  ||        |   || | | ||    |   |          |    ||  |   |||||||||||||||||  |||||||| | || |||||||||||| | |||||||| |||
atcagtctatcgaatccacctaccaggactaggatcagttgtaatgttcgcctcccttgggataattcatgaaagaagacaaattgtatttcgtgcttagGTGTTGCAAAGTGGTTGAGCAGGTCCAAACTA-AACCATGGCTGATGGTGAGGAAGTCCAGCCTTTGGTGTGCGACAATGGCTCTGGAATGGTTAAG

upper sequence: GRMZM2G067985_T02 (Zea mays), 3'ss of exon 1
lower sequence: PP1S372_38V6.4 (Physcomitrella patens), 3'ss of exon 1
--acctgcacattcaaatccagtgtttcttttcaatcacatagtgaactaaaacactctcatcactcagtgatatttgattttatccacatgccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACCGGAATGGTCAAG
  |     |   |||  |  | ||||    | |  |   ||| |  |  |||  |  |  ||        |   || | | ||    |   |          |    ||  |   |||||||||||||||||  |||||||| | || |||||||||||| | |||||||| |||
ccaggactaggatcagttgtaatgttcgcctcccttgggataattcatgaaagaagacaaattgtatttcgtgcttaggtgttgcaaagtggttgagcagGTCCAAACTA-AACCATGGCTGATGGTGAGGAAGTCCAGCCTTTGGTGTGCGACAATGGCTCTGGAATGGTTAAG

upper sequence: GRMZM2G067985_T02 (Zea mays), 3'ss of exon 1
lower sequence: PP1S372_38V6.3 (Physcomitrella patens), 3'ss of exon 1
----------acctgcac---attcaaatccagtgtttcttttcaatcacatagtgaactaaaacactctcatcactcagtgatatttgattttatccacatgccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACCGGAATGGTCAAG
          ||| | ||     |||  |  | ||||    | |  |   ||| |  |  |||  |  |  ||        |   || | | ||    |   |          |    ||  |   |||||||||||||||||  |||||||| | || |||||||||||| | |||||||| |||
gaatccacctaccaggactaggatcagttgtaatgttcgcctcccttgggataattcatgaaagaagacaaattgtatttcgtgcttaggtgttgcaaagTGGTTGAGCAGGTCCAAACTA-AACCATGGCTGATGGTGAGGAAGTCCAGCCTTTGGTGTGCGACAATGGCTCTGGAATGGTTAAG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211349483|gb|FL098143.1|FL098143
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|32914440|gb|CF019252.1|CF019252
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211351894|gb|FL098160.1|FL098160
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211349474|gb|FL098134.1|FL098134
EST:     TGGTGCTGAGGCTTTGGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211462372|gb|FL098213.1|FL098213
EST:     TGGTGCTGAGGCTTTGGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTTTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211349476|gb|FL098136.1|FL098136
EST:     GGTGCTGAGGCTTTGGTTGGTCTCTTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: GGTGCTGAGGCTTTCGTTGGTCTC-TTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211457316|gb|FL098178.1|FL098178
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211349481|gb|FL098141.1|FL098141
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211354297|gb|FL098171.1|FL098171
EST:     TGGTGCTGAGGCTTTGGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211457326|gb|FL098188.1|FL098188
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211462377|gb|FL098218.1|FL098218
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCA-C--                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211459850|gb|FL098201.1|FL098201
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|32914580|gb|CF019392.1|CF019392
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGTTT
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTG-CG
EST: gi|211459854|gb|FL098205.1|FL098205
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCKA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211351883|gb|FL098149.1|FL098149
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211351890|gb|FL098156.1|FL098156
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|6626303|gb|AW257835.1|AW257835
EST:     TGGTGCTGAGGCTTTGGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211464902|gb|FL098225.1|FL098225
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211457320|gb|FL098182.1|FL098182
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211462378|gb|FL098219.1|FL098219
EST:     TGGTGCTGAGGCTTTGGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|32858721|gb|CD998402.1|CD998402
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|87156786|gb|DY401575.1|DY401575
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211349482|gb|FL098142.1|FL098142
EST:     TGGTGCTGAGGCTTTGGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211464901|gb|FL098224.1|FL098224
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCA-C--                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211457325|gb|FL098187.1|FL098187
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211464905|gb|FL098228.1|FL098228
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCGCCCA-C--                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211354287|gb|FL098161.1|FL098161
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCA-C--                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211349480|gb|FL098140.1|FL098140
EST:     TGGTGCTGAGGCTTTGGTTGGTCTCTTCGGCGGCGACGAGCACCCA-C--                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCKA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211459845|gb|FL098196.1|FL098196
EST:     TGGTGCTGAGGCTTTGGTTGGTCTCTTCGGCGGCGACGAGCACCCA-C--                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211464898|gb|FL098221.1|FL098221
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211464900|gb|FL098223.1|FL098223
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCA-C--                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|32914576|gb|CF019388.1|CF019388
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211457314|gb|FL098176.1|FL098176
EST:     TGGTGCTGAGGCTTTGGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCKA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211351891|gb|FL098157.1|FL098157
EST:     TGGTGCTGAGGCTTTGGTTGGTCTCTTCGGCGGCGACGAGCACCCA-C--                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211457327|gb|FL098189.1|FL098189
EST:     TGGTGCTGAGGCTTTGGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|23199688|gb|BU582253.1|BU582253
EST:     GG-GCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGCACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: GGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCG-ACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211462370|gb|FL098211.1|FL098211
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGG
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGC-G
EST: gi|211457323|gb|FL098185.1|FL098185
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTACTGCG
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGT-CTGCG
EST: gi|211462368|gb|FL098209.1|FL098209
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211459840|gb|FL098191.1|FL098191
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211354299|gb|FL098173.1|FL098173
EST:     TGGTGCTGAGGCTTTGGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|32912100|gb|CF016912.1|CF016912
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGTCTTANGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211464903|gb|FL098226.1|FL098226
EST:     TGGTGCTGAGGCTTTGGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211457318|gb|FL098180.1|FL098180
EST:     TGGTGCTGAGGCTTTGGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211464908|gb|FL098231.1|FL098231
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211351884|gb|FL098150.1|FL098150
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211354298|gb|FL098172.1|FL098172
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCKA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211351893|gb|FL098159.1|FL098159
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCA-C--                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAAGCCTCTTGTCTGCA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCC-AGCCTCTTGTCTGC-
EST: gi|211349485|gb|FL098145.1|FL098145
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|32850906|gb|CD990587.1|CD990587
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCA-C--                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211462373|gb|FL098214.1|FL098214
EST:     TGGTGCTGAGGCTTTGGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211354288|gb|FL098162.1|FL098162
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCA-C--                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211459841|gb|FL098192.1|FL098192
EST:     TGGTGCTGAGGCTTTGGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211457328|gb|FL098190.1|FL098190
EST:     TGGTGCTGAGGCTTTGGTTGGTCTCTTCGGCGGCGACGAGCACCCA-C--                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211351880|gb|FL098146.1|FL098146
EST:     TGGTGCTGAGGCTTTGGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211459849|gb|FL098200.1|FL098200
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211457315|gb|FL098177.1|FL098177
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211457321|gb|FL098183.1|FL098183
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACYCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|15499299|gb|BI595812.1|BI595812
EST:     GNGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: G-GTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211464899|gb|FL098222.1|FL098222
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCA-C--                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211459853|gb|FL098204.1|FL098204
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211464909|gb|FL098232.1|FL098232
EST:     TGGTGCTGAGGCTTTGGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211459848|gb|FL098199.1|FL098199
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211462369|gb|FL098210.1|FL098210
EST:     TGGTGCTGAGGCTTTGGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211462366|gb|FL098207.1|FL098207
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211351881|gb|FL098147.1|FL098147
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211462365|gb|FL098206.1|FL098206
EST:     TGGTGCTGAGGCTTTGGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211457319|gb|FL098181.1|FL098181
EST:     TGGTGCTGAGGCTTTGGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|6626553|gb|AW258085.1|AW258085
EST:     TGGTGCTGAGGCTTTGGTTGGTCTCTTCGGCGGCGACGAGCACCCA-C--                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211351889|gb|FL098155.1|FL098155
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211351885|gb|FL098151.1|FL098151
EST:     TGGTGCTGAGGCTTTGGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211354293|gb|FL098167.1|FL098167
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCA-C--                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|193502480|gb|AM937802.1|AM937802
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211462374|gb|FL098215.1|FL098215
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCA-C--                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211457324|gb|FL098186.1|FL098186
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211349475|gb|FL098135.1|FL098135
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCA-C--                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211351882|gb|FL098148.1|FL098148
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211459844|gb|FL098195.1|FL098195
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211464904|gb|FL098227.1|FL098227
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211354290|gb|FL098164.1|FL098164
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211464907|gb|FL098230.1|FL098230
EST:     TGGTGCTGAGGCTTTGGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211457317|gb|FL098179.1|FL098179
EST:     TGGTGCTGAGGCTTTGGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211349477|gb|FL098137.1|FL098137
EST:     TGGTGCTGAGGCTTTGGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211349479|gb|FL098139.1|FL098139
EST:     TGGTGCTGAGGCTTTGGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211351886|gb|FL098152.1|FL098152
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCA-                         RA-TTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA
EST: gi|211349484|gb|FL098144.1|FL098144
EST:     TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAG                         CAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCAA
genomic: TGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 48 (upstream exon), 49 (downstream exon)
Score: 590

TGTGTCTCTGTCTGTCGCTCTCGCTCTCAGACGACTGGGCCGCCGCCGCTTGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACCGGAATGGTCAAG


Block sizes: 48 (upstream exon), 49 (downstream exon)
Score: 759

TGTGTCTCTGTCTGTCGCTCTCGCTCTCAGACGACTGGGCCGCCGCCGCTTGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACCGGAATGGTCAAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 466

TGTGTCTCTGTCTGTCGCTCTCGCTCTCAGACGACTGGGCCGCCGCCGCTTGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACCGGAATGGTCAAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 481

TGTGTCTCTGTCTGTCGCTCTCGCTCTCAGACGACTGGGCCGCCGCCGCTTGGTGCTGAGGCTTTCGTTGGTCTCTTCGGCGGCGACGAGCACCCACCAGgtactcccgc ... ccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACCGGAATGGTCAAG




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ctaaaacactctcatcactcagtgatatttgattttatccacatgccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACCGGAATGGTCAAG
                      tgatatttgattttat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
acctgcacattcaaatccagtgtttcttttcaatcacatagtgaactaaaacactctcatcactcagtgatatttgattttatccacatgccacttgcagCAGTTCTGTAGAAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACCGGAATGGTCAAG

acctgca
- - - -cattcaa
- - - - - - - - - - tgtttct
- - - - - - - - - - - - - - - -aatcaca
- - - - - - - - - - - - - - - - - - - - - -aactaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccacatg