1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
...ctttgtagggtttcatcgattcttgtgttacatctgtggtctaggaaaattgctgttttatgtttctcagtgaagaaaaataccgatactaataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTTCTGCTGAGCAGCCGAAGAGGGCCCCTAAGCTCAATGAAAGGATCCTCT
species | Zea mays |
transcript | GRMZM2G061928_T02 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211402002|gb|FL112896.1|FL112896
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211270185|gb|FL112868.1|FL112868
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|31356747|gb|CD441104.1|CD441104
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: ACTCCGACAGTCCGACCGCAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|31355864|gb|CD440221.1|CD440221
genomic: ACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|13237104|gb|BG355118.1|BG355118
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: ACTCCGAAACTCCGACAGTCCGACCACAAG GGCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211402006|gb|FL112900.1|FL112900
genomic: ACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211402013|gb|FL112907.1|FL112907
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211404548|gb|FL112915.1|FL112915
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCTTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211270192|gb|FL112875.1|FL112875
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211270189|gb|FL112872.1|FL112872
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG YT-TTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211402014|gb|FL112908.1|FL112908
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211404549|gb|FL112916.1|FL112916
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211402003|gb|FL112897.1|FL112897
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAA- G-YTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211404557|gb|FL112924.1|FL112924
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211270184|gb|FL112867.1|FL112867
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211407095|gb|FL112926.1|FL112926
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211402012|gb|FL112906.1|FL112906
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211404550|gb|FL112917.1|FL112917
genomic: GCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|1531734|gb|AA051884.1|AA051884
genomic: GGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211402010|gb|FL112904.1|FL112904
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTTCGACAGTCCGACCACAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|7216723|gb|AW562845.1|AW562845
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211270194|gb|FL112877.1|FL112877
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211399469|gb|FL112895.1|FL112895
genomic: GCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG YT-TTGTTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCEST: gi|211402016|gb|FL112910.1|FL112910
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTG-TGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGC
EST: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAG GTCTTGTGCGGGATCCACAGCAAGGATGAGTGAAGAGGATAAGACTGCTGCEST: gi|211402015|gb|FL112909.1|FL112909
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAG-AAGGATGAGTGAAGAGGATAAGACTGCTGC
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211399460|gb|FL112886.1|FL112886
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG YT-TTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|5846897|gb|AI999980.1|AI999980
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211407098|gb|FL112929.1|FL112929
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTTAAGAGGATAAGACTGCTGCTEST: gi|211404554|gb|FL112921.1|FL112921
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211404546|gb|FL112913.1|FL112913
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: CCTCCGTYTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211402011|gb|FL112905.1|FL112905
genomic: CCTCCG-CTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|31353516|gb|CD437873.1|CD437873
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211404552|gb|FL112919.1|FL112919
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAA- G-YTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211399457|gb|FL112883.1|FL112883
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211404547|gb|FL112914.1|FL112914
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAA- G-YTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211399465|gb|FL112891.1|FL112891
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|5325087|gb|AI783278.1|AI783278
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211399468|gb|FL112894.1|FL112894
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|32851386|gb|CD991067.1|CD991067
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCG-CTCCG-AACTCCGACAGTCCGACCACAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211270190|gb|FL112873.1|FL112873
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211267755|gb|FL112864.1|FL112864
genomic: GCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211267756|gb|FL112865.1|FL112865
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAA- GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|60351510|gb|DN218483.1|DN218483
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211270187|gb|FL112870.1|FL112870
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAA- GTCTTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCEST: gi|211399467|gb|FL112893.1|FL112893
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTC-TTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGC
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG YT-TTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211399455|gb|FL112881.1|FL112881
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211407097|gb|FL112928.1|FL112928
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAA- G-YTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211270193|gb|FL112876.1|FL112876
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211399459|gb|FL112885.1|FL112885
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAA- GTYTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|13237307|gb|BG355321.1|BG355321
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCGACTCCGAAACTCCGACAGTCCGACCACAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|31355702|gb|CD440059.1|CD440059
genomic: GCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: CCTCCGCTGCCGGTCGCCGCTCTCCGAGACTCCGACAGTCCGACCGCAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|78104562|gb|DV522980.1|DV522980
genomic: CCTCCGCTGCCGGTCGCCG-ACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|31349512|gb|CD433869.1|CD433869
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211404553|gb|FL112920.1|FL112920
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG YT-TTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|32919374|gb|CF024186.1|CF024186
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|33090854|gb|CF050848.1|CF050848
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211399456|gb|FL112882.1|FL112882
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211404558|gb|FL112925.1|FL112925
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGACTCCNAAACTCCGACAGTCCGACCACAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211270186|gb|FL112869.1|FL112869
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211399461|gb|FL112887.1|FL112887
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211399464|gb|FL112890.1|FL112890
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAA- G-YTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211270197|gb|FL112880.1|FL112880
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|33770718|gb|CF273012.1|CF273012
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|7304728|gb|AW600667.1|AW600667
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTEST: gi|211270195|gb|FL112878.1|FL112878
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
EST: GCCTCCGCTGCCGGTCGCCGTCTCCGAGACTCCGACAGTCCGACCGCAAG GTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
genomic: GCCTCCGCTGCCGGTCGCCGACTCCGAAACTCCGACAGTCCGACCACAAGgtgaggatcc ... aataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCT
aaaattgctgttttatgtttctcagtgaagaaaaataccgatactaataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTTCTGCTGAGCAGCCGAAGAGGGCCCCTAAGCTCAATGAAAGGATCCTCT
tactaat putative branch site (score: 429)
atactaataatgta TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ctttgtagggtttcatcgattcttgtgttacatctgtggtctaggaaaattgctgttttatgtttctcagtgaagaaaaataccgatactaataatgtagGTCTTGTGCGGGATCCACAGAAGGATGAGTGAAGAGGATAAGACTGCTGCTTCTGCTGAGCAGCCGAAGAGGGCCCCTAAGCTCAATGAAAGGATCCTCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA
- - - - - - - - - attcttg
- - - - - - - - - - - - - - - - - - - - - - - - - tgctgtt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaaata