1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtaagactccaccacagctagatctgtcacacgcctcaactagctggtgactatgcaccttcatctgcgttgtgcgtggtagattgattggtgggattgtataagtcgatttgactcgtgaattttggctgcctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGTCGTACGAGGACAACATCAAGAAGATCATCGATTTCAGCACA
species | Zea mays |
transcript | GRMZM2G048703_T02 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211118686|gb|FK964926.1|FK964926
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211119484|gb|FK964938.1|FK964938
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|148936054|gb|EC880114.2|EC880114
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|87153049|gb|DY397838.1|DY397838
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|6445424|gb|AW179492.1|AW179492
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211119483|gb|FK964937.1|FK964937
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211254819|gb|FK964954.1|FK964954
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211257255|gb|FK964961.1|FK964961
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211119475|gb|FK964929.1|FK964929
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|74232667|gb|DT640581.1|DT640581
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211119482|gb|FK964936.1|FK964936
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211254812|gb|FK964947.1|FK964947
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|28361610|gb|CB239966.1|CB239966
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|93012199|gb|EB637719.1|EB637719
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|78088649|gb|DV517042.1|DV517042
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: TCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211254818|gb|FK964953.1|FK964953
genomic: TCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|31612425|gb|CD569047.1|CD569047
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: TTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|71327672|gb|DR800450.1|DR800450
genomic: TTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211257256|gb|FK964962.1|FK964962
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|91053786|gb|EB164204.1|EB164204
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: CAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211118687|gb|FK964927.1|FK964927
genomic: CAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCTCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211254816|gb|FK964951.1|FK964951
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211254820|gb|FK964955.1|FK964955
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|14245305|gb|BG873887.1|BG873887
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211118679|gb|FK964919.1|FK964919
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211254811|gb|FK964946.1|FK964946
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|74232666|gb|DT640580.1|DT640580
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: ACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|19058335|gb|BM737002.1|BM737002
genomic: ACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211119478|gb|FK964932.1|FK964932
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|60351308|gb|DN218281.1|DN218281
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211118683|gb|FK964923.1|FK964923
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211254810|gb|FK964945.1|FK964945
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211118678|gb|FK964918.1|FK964918
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211118684|gb|FK964924.1|FK964924
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211254809|gb|FK964944.1|FK964944
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTARG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211257253|gb|FK964959.1|FK964959
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211119488|gb|FK964942.1|FK964942
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211118674|gb|FK964914.1|FK964914
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211119485|gb|FK964939.1|FK964939
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211254822|gb|FK964957.1|FK964957
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCAGCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211254814|gb|FK964949.1|FK964949
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCTCGACCTCAAGTCCGGCCTTCACCCCCTTAGGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAEST: gi|211118682|gb|FK964922.1|FK964922
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTA-GGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCA
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|78088650|gb|DV517043.1|DV517043
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211119477|gb|FK964931.1|FK964931
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|31349975|gb|CD434332.1|CD434332
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211254821|gb|FK964956.1|FK964956
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211119481|gb|FK964935.1|FK964935
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211119487|gb|FK964941.1|FK964941
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211118677|gb|FK964917.1|FK964917
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|28361792|gb|CB240148.1|CB240148
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|149070116|gb|EE158515.2|EE158515
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211119476|gb|FK964930.1|FK964930
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211254808|gb|FK964943.1|FK964943
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211118676|gb|FK964916.1|FK964916
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|89760553|gb|DY688916.1|DY688916
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211254813|gb|FK964948.1|FK964948
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|149005273|gb|EE039821.2|EE039821
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211119474|gb|FK964928.1|FK964928
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211257252|gb|FK964958.1|FK964958
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211118680|gb|FK964920.1|FK964920
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211118681|gb|FK964921.1|FK964921
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|8368073|gb|BE051018.1|BE051018
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGTAGCGAGGTCGCAGEST: gi|31612426|gb|CD569048.1|CD569048
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211118685|gb|FK964925.1|FK964925
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211119479|gb|FK964933.1|FK964933
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211118675|gb|FK964915.1|FK964915
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCTCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGEST: gi|211254817|gb|FK964952.1|FK964952
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
EST: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGG CACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
genomic: AGACCGAGCGCCGCAACCGCGACCTCAAGTCCGGCCTTCACCCCCTTAGGgtaagactcc ... ctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAG
ttggtgggattgtataagtcgatttgactcgtgaattttggctgcctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGTCGTACGAGGACAACATCAAGAAGATCATCGATTTCAGCACA
atttgac putative branch site (score: 132)
cctgtct putative PPT
attgtataa TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaagactccaccacagctagatctgtcacacgcctcaactagctggtgactatgcaccttcatctgcgttgtgcgtggtagattgattggtgggattgtataagtcgatttgactcgtgaattttggctgcctgtctgcagCACAAACTCGTGCTCTGGTACACTCGCCGGACGCCTGGAGCGAGGTCGCAGTCGTACGAGGACAACATCAAGAAGATCATCGATTTCAGCACA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGATCA