Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|22521317|gb|BU080128.1|BU080128EST: TCGGGCTCTGGTACCTCTTCAACATCTACTTCAACATCTACAACAAGCAG GTTCTGAAGGTTTTGCCATACCCTATAAACATCACAACGGTGCAGTTTGCT
genomic: TCGGGCTCTGGTACCTCTTCAACATCTACTTCAACATCTACAACAAGCAGgtgagctgac ... tgctctacagGTTCTGAAGGTTTTGCCATACCCTATAAACATCACAACGGTGCAGTTTGCT
EST:
gi|88746767|gb|DY530908.1|DY530908EST: TCGGGCTCTGGTACCTCTTCAACATCTACTTCAACATCTACAACAAGCAG GTTCTGAAGGTTTTGCCATACCCTATAAACATCACAACGGTGCAGTTTGCT
genomic: TCGGGCTCTGGTACCTCTTCAACATCTACTTCAACATCTACAACAAGCAGgtgagctgac ... tgctctacagGTTCTGAAGGTTTTGCCATACCCTATAAACATCACAACGGTGCAGTTTGCT
EST:
gi|21891481|gb|BQ744694.1|BQ744694EST: TCGGGCTCTGGTACCTCTTCAACATCTACTTCAACATCTACAACAAGCAG GTTCTGAAGGTTTTGCCATACCCTATAAACATCACAACGGTGCAGTTTGCT
genomic: TCGGGCTCTGGTACCTCTTCAACATCTACTTCAACATCTACAACAAGCAGgtgagctgac ... tgctctacagGTTCTGAAGGTTTTGCCATACCCTATAAACATCACAACGGTGCAGTTTGCT
EST:
gi|87156219|gb|DY401008.1|DY401008EST: TCGGGCTCTGGTACCTCTTCAACATCTACTTCAACATCTACAACAAGCAG GTTCTGAAGGTTTTGCCATACCCTATAAACATCACAACGGTGCAGTTTGCT
genomic: TCGGGCTCTGGTACCTCTTCAACATCTACTTCAACATCTACAACAAGCAGgtgagctgac ... tgctctacagGTTCTGAAGGTTTTGCCATACCCTATAAACATCACAACGGTGCAGTTTGCT
EST:
gi|26559240|gb|CA831475.1|CA831475EST: TCGGGCTCTGGTACCTCTTCAACATCTACTTCAACATCTACAACAAGCAG GTTCTGAAGGTTTTGCCATACCCTATAAACATCACAACGGTGCAGTTTGCT
genomic: TCGGGCTCTGGTACCTCTTCAACATCTACTTCAACATCTACAACAAGCAGgtgagctgac ... tgctctacagGTTCTGAAGGTTTTGCCATACCCTATAAACATCACAACGGTGCAGTTTGCT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
atcatgtcaccttttagttagttttctgaggaatacttgatgatcaacaacaattaccagtaaatcatacaactttctaagctgtacttatgctctacagGTTCTGAAGGTTTTGCCATACCCTATAAACATCACAACGGTGCAGTTTGCTGTTGGAAGTGCCATTGCTTTGTTCATGTGGATCACTGGTATCCATAAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG