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gtgagctctctcactccttcactctagcccaatccacaaaagcaattttctctcgtaaccctagattcgttttttcctccagGCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTGTGAATCGCCGGAAAAACATCTGTTGGCGGCGTCATGAATAAGCGGCCCC
species | Zea mays |
transcript | GRMZM2G042398_T02 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CTCGCGCGACTGTCTCCGCCGACGACCATAAGCCGCCTGCCTCATCGCTG GCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTWCAGTAGAATTGEST: gi|211188185|gb|FL095412.1|FL095412
genomic: CTCGCGCGACTGTCTCCGCCGACGACCATAAGCCGCCTGCCTCATCGCTGgtgagctctc ... tttcctccagGCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTG
EST: CTCGCGCGACTGTCTCCGCCGACGACCATAAGCCGCCTGCCTCATCGCTG GCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTGEST: gi|211031436|gb|FL127268.1|FL127268
genomic: CTCGCGCGACTGTCTCCGCCGACGACCATAAGCCGCCTGCCTCATCGCTGgtgagctctc ... tttcctccagGCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTG
EST: CTCGCGCGACTGTCTCCGCCGACGACCATAAGCCGCCTGCCTCATCGCTG GCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTGEST: gi|211188175|gb|FL095402.1|FL095402
genomic: CTCGCGCGACTGTCTCCGCCGACGACCATAAGCCGCCTGCCTCATCGCTGgtgagctctc ... tttcctccagGCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTG
EST: CTCGCGCGACTGTCTCCGCCGACGACCATAAGCCGCCTGCCTCATCGCTG GCCACACAACGWTCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTGEST: gi|211188182|gb|FL095409.1|FL095409
genomic: CTCGCGCGACTGTCTCCGCCGACGACCATAAGCCGCCTGCCTCATCGCTGgtgagctctc ... tttcctccagGCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTG
EST: CTCGCGCGACTGTCTCCGCCGACGACCATAAGCCGCCTGCCTCATCGCTG GCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTGEST: gi|211188183|gb|FL095410.1|FL095410
genomic: CTCGCGCGACTGTCTCCGCCGACGACCATAAGCCGCCTGCCTCATCGCTGgtgagctctc ... tttcctccagGCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTG
EST: CTCGCGCGACTGTCTCCGCCGACGACCATAAGCCGCCTGCCTCATCGCTG GCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTGEST: gi|211185780|gb|FL095396.1|FL095396
genomic: CTCGCGCGACTGTCTCCGCCGACGACCATAAGCCGCCTGCCTCATCGCTGgtgagctctc ... tttcctccagGCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTG
EST: CTCGCGCGACTGTCTCCGCCGACGACCATAAGCCGCCTGCCTCATCGCTG GCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTGEST: gi|211188173|gb|FL095400.1|FL095400
genomic: CTCGCGCGACTGTCTCCGCCGACGACCATAAGCCGCCTGCCTCATCGCTGgtgagctctc ... tttcctccagGCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTG
EST: CTCGCGCGACTGTCTCCGCCGACGACCATAAGCCGCCTGCCTCATCGCTG GCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTGEST: gi|211185783|gb|FL095399.1|FL095399
genomic: CTCGCGCGACTGTCTCCGCCGACGACCATAAGCCGCCTGCCTCATCGCTGgtgagctctc ... tttcctccagGCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTG
EST: CTCGCGCGACTGTCTCCGCCGACGACCATAAGCCGCCTGCCTCATCGCTG GCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTGEST: gi|211185782|gb|FL095398.1|FL095398
genomic: CTCGCGCGACTGTCTCCGCCGACGACCATAAGCCGCCTGCCTCATCGCTGgtgagctctc ... tttcctccagGCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTG
EST: CTCGCGCGACTGTCTCCGCCGACGACCATAAGCCGCCTGCCTCATCGCTG GCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTGEST: gi|211188181|gb|FL095408.1|FL095408
genomic: CTCGCGCGACTGTCTCCGCCGACGACCATAAGCCGCCTGCCTCATCGCTGgtgagctctc ... tttcctccagGCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTG
EST: CTCGCGCGACTGTCTCCGCCGACGACCATAAGCCGCCTGCCTCATCGCTG GCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTGEST: gi|211188177|gb|FL095404.1|FL095404
genomic: CTCGCGCGACTGTCTCCGCCGACGACCATAAGCCGCCTGCCTCATCGCTGgtgagctctc ... tttcctccagGCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTG
EST: CTCGCGCGACTGTCTCCGCCGACGACCATWAGCCGCCTGCCTCATCGCTG GCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTTCAGTAGAATTGEST: gi|211188179|gb|FL095406.1|FL095406
genomic: CTCGCGCGACTGTCTCCGCCGACGACCATAAGCCGCCTGCCTCATCGCTGgtgagctctc ... tttcctccagGCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTG
EST: CTCGCGCGACTGTCTCCGCCGACGACCATAAGCCGCCTGCCTCATCGCTG GCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTGEST: gi|211188176|gb|FL095403.1|FL095403
genomic: CTCGCGCGACTGTCTCCGCCGACGACCATAAGCCGCCTGCCTCATCGCTGgtgagctctc ... tttcctccagGCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTG
EST: CTCGCGCGACTGTCTCCGCCGACGACCATAAGCCGCCTGCCTCATCGCTG GCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTGEST: gi|211188174|gb|FL095401.1|FL095401
genomic: CTCGCGCGACTGTCTCCGCCGACGACCATAAGCCGCCTGCCTCATCGCTGgtgagctctc ... tttcctccagGCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTG
EST: CTCGCGCGACTGTYTCCGCCGACGACCATAAGCCGCCTGCCTCATCGCTG GCCACACAACGWTCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTGEST: gi|211185781|gb|FL095397.1|FL095397
genomic: CTCGCGCGACTGTCTCCGCCGACGACCATAAGCCGCCTGCCTCATCGCTGgtgagctctc ... tttcctccagGCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTG
EST: CTCGCGCGACTGTCTCCGCCGACGACCATAAGCCGCCTGCCTCATCGCTG GCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTG
genomic: CTCGCGCGACTGTCTCCGCCGACGACCATAAGCCGCCTGCCTCATCGCTGgtgagctctc ... tttcctccagGCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTG
cccaatccacaaaagcaattttctctcgtaaccctagattcgttttttcctccagGCCACACAACGATCCGTGGCAAGGAAAGCACGAGGACGTACAGTAGAATTGTGAATCGCCGGAAAAACATCTGTTGGCGGCGTCATGAATAAGCGGCCCC
tcgtaac putative branch site (score: 2)
ttcgttttttcctcc putative PPT
aattttct TA-rich tract