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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtacgaggccgtcgacaacacccaacttctcatcaggtgcgtacgtacccaatgcagcttcaggtcttgatgcttcagcatcttcacttgttcagGCTGTTCTTCCGCCGTCGCCGTCGTCGTTCGGGTTCCTCGTGAAGAACAATGTGGCGATGGCCAAAACCATTCTGGCCATCGTGGCCATTATCTCTCTGC

Basic information

species Zea mays
transcript GRMZM2G038878_T01
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gtacgtacccaatgcagcttcaggtcttgatgcttcagcatcttcacttgttcagGCTGTTCTTCCGCCGTCGCCGTCGTCGTTCGGGTTCCTCGTGAAGAACAATGTGGCGATGGCCAAAACCATTCTGGCCATCGTGGCCATTATCTCTCTGC
                        tcttgat  putative branch site (score: 4)
                                        tcttcactt  putative PPT