1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
...ctgttatctgctgtatgcaccttgatgatctttggtatttgtagtatatacgaactgcacttcacttaaccatacattgcctctgctttgtaattgtcagGTGGAACGGTCTAGCAGCTCGTATAGTCAGCACAGACCTAGAAGGCCTCCTCCAGATTTGCCTTCATTGCTTCTTCACGGCCGAATCGTTTATATTGGCA
species | Zea mays |
transcript | GRMZM2G030072_T02 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GTTCCTCGAGATCTTCCAGAACACCAAACTCATGGCCTCGCCCGGCGCAG GTGGAACGGTCTAGCAGCTCGTATAGTCAGCACAGACCTAGAAGGCCTCCEST: gi|211112205|gb|FK971815.1|FK971815
genomic: GTTCCTCGAGATCTTCCAGAACACCAAACTCATGGCCTCGCCCG-CGCAGgtgaggcttc ... taattgtcagGTGGAACGGTCTAGCAGCTCGTATAGTCAGCACAGACCTAGAAGGCCTCC
EST: CGTTCCTCGAGATCTTCCAGAACACCAAACTCATGGCCTCGCCCGCGCAG GTGGAACGGTCEST: gi|211078556|gb|FL010811.1|FL010811
genomic: CGTTCCTCGAGATCTTCCAGAACACCAAACTCATGGCCTCGCCCGCGCAGgtgaggcttc ... taattgtcagGTGGAACGGTC
EST: CGTTCCTCGAGATCTTCCAGAACACCAAACTCATGGCCTCGCCCGCGCAG GTGGAACGGTCTAGCAGCTCGTATAGTCAGCACAGACCTAGAAGGCCTCCTEST: gi|211078557|gb|FL010812.1|FL010812
genomic: CGTTCCTCGAGATCTTCCAGAACACCAAACTCATGGCCTCGCCCGCGCAGgtgaggcttc ... taattgtcagGTGGAACGGTCTAGCAGCTCGTATAGTCAGCACAGACCTAGAAGGCCTCCT
EST: CGTTCCTCGAGATCTTCCAGAACACCAAACTCATGGCCTCGCCCGCGCAG GTGGAACGGTCTAGCAGCTCGTATAGTCAGCACAGACCTAGAAGGCCTCCTEST: gi|211078559|gb|FL010814.1|FL010814
genomic: CGTTCCTCGAGATCTTCCAGAACACCAAACTCATGGCCTCGCCCGCGCAGgtgaggcttc ... taattgtcagGTGGAACGGTCTAGCAGCTCGTATAGTCAGCACAGACCTAGAAGGCCTCCT
EST: CGTTCCTCGAGATCTTCCAGAACACCAAACTCATGGCCTCGCCCGCGCAG GTGGAACGGTCTAGCAGCTCGTATAGTCAGCACAGACCTAGAAGGCCTCCTEST: gi|211078554|gb|FL010809.1|FL010809
genomic: CGTTCCTCGAGATCTTCCAGAACACCAAACTCATGGCCTCGCCCGCGCAGgtgaggcttc ... taattgtcagGTGGAACGGTCTAGCAGCTCGTATAGTCAGCACAGACCTAGAAGGCCTCCT
EST: CGTTCCTCGAGATCTTCCAGAACACCAAACTCATGGCCTCGCCCGCGCAG GTGGAACGGTCTAGCAGCTCGTATAGTCAGCACAGACCTAGAAGGC-TCCTEST: gi|211078562|gb|FL010817.1|FL010817
genomic: CGTTCCTCGAGATCTTCCAGAACACCAAACTCATGGCCTCGCCCGCGCAGgtgaggcttc ... taattgtcagGTGGAACGGTCTAGCAGCTCGTATAGTCAGCACAGACCTAGAAGGCCTCCT
EST: CGTTCCTCGAGATCTTCCAGAACAMCAAACTCATGGCCTCGCCCGCGCAR GTGGAACGGTCTAGCAGCTCGTATAGTCAGCACAGEST: gi|87157696|gb|DY402485.1|DY402485
genomic: CGTTCCTCGAGATCTTCCAGAACACCAAACTCATGGCCTCGCCCGCGCAGgtgaggcttc ... taattgtcagGTGGAACGGTCTAGCAGCTCGTATAGTCAGCACAG
EST: CGTTCCTCGAGATCTTCCAGAACACCAAACTCATGGCCTCGCCCGCGCAG GTGGAACGGTCTAGCAGCTCGTATAGTCAGCACAGACCTAGAAGGCCTCCTEST: gi|211078553|gb|FL010808.1|FL010808
genomic: CGTTCCTCGAGATCTTCCAGAACACCAAACTCATGGCCTCGCCCGCGCAGgtgaggcttc ... taattgtcagGTGGAACGGTCTAGCAGCTCGTATAGTCAGCACAGACCTAGAAGGCCTCCT
EST: CGTTCCTCGAGATCTTCCAGAACACCAAACTCATGGCCTCGCCCGCGCAG GTGGAACGGTCTAGCAGCTCGTATAGTCAGCACAGACCTAGAAGGCCTCCTEST: gi|211075819|gb|FL010805.1|FL010805
genomic: CGTTCCTCGAGATCTTCCAGAACACCAAACTCATGGCCTCGCCCGCGCAGgtgaggcttc ... taattgtcagGTGGAACGGTCTAGCAGCTCGTATAGTCAGCACAGACCTAGAAGGCCTCCT
EST: CGTTCCTCGAGATCTTCCAGAACACCAAACTCATGGCCTCGCCCGCGCAG GTGGAACGGTCTAGCAGCTCGTATAGTCAGCACAEST: gi|211075818|gb|FL010804.1|FL010804
genomic: CGTTCCTCGAGATCTTCCAGAACACCAAACTCATGGCCTCGCCCGCGCAGgtgaggcttc ... taattgtcagGTGGAACGGTCTAGCAGCTCGTATAGTCAGCACA
EST: CGTTCCTCGAGATCTTCCAGAACACCAAACTCATGGCCTCGCCCGCGCAG GTGGAACGGTCTAGCAGCTCGTATAGTCAGCACAGAEST: gi|22472811|gb|BU037291.1|BU037291
genomic: CGTTCCTCGAGATCTTCCAGAACACCAAACTCATGGCCTCGCCCGCGCAGgtgaggcttc ... taattgtcagGTGGAACGGTCTAGCAGCTCGTATAGTCAGCACAGA
EST: CGTTCCTCGAGATCTTCCAGAACACCAAACTCATGGCCTCGCCCGCGCAG GTGGAACGGTCTAGCAGCTCGTATAGTCAGCAACAGACEST: gi|211078561|gb|FL010816.1|FL010816
genomic: CGTTCCTCGAGATCTTCCAGAACACCAAACTCATGGCCTCGCCCGCGCAGgtgaggcttc ... taattgtcagGTGGAACGGTCTAGCAGCTCGTATAGTCAGCA-CAGAC
EST: CGTTCCTCGAGATCTTCCAGAACACCAAACTCATGGCCTCGCC-GCGCAG GTGGAACGGTCTAGCAGCTCGTATAGTCAGCACAGACCTAGAAGGCCTCCTEST: gi|26558842|gb|CA831077.1|CA831077
genomic: CGTTCCTCGAGATCTTCCAGAACACCAAACTCATGGCCTCGCCCGCGCAGgtgaggcttc ... taattgtcagGTGGAACGGTCTAGCAGCTCGTATAGTCAGCACAGACCTAGAAGGCCTCCT
EST: CGTTCCTCGAGATCTTCCAGAACACCAAACTCATGGCCTCGCCCGCGCAG GTGGAACGGTCTAGCAGCTCGTATAGTCAGCACAGACCTAGAAGGCCTCCTEST: gi|211075820|gb|FL010806.1|FL010806
genomic: CGTTCCTCGAGATCTTCCAGAACACCAAACTCATGGCCTCGCCCGCGCAGgtgaggcttc ... taattgtcagGTGGAACGGTCTAGCAGCTCGTATAGTCAGCACAGACCTAGAAGGCCTCCT
EST: CGTTCCTCGAGATCTTCCATAACACCAAACTCATGGCCTCGCCCGCGCAG GTGGAACGGTCTAGCAGCTCGTATAGTCAGCACAGACCTAGAAGG
genomic: CGTTCCTCGAGATCTTCCAGAACACCAAACTCATGGCCTCGCCCGCGCAGgtgaggcttc ... taattgtcagGTGGAACGGTCTAGCAGCTCGTATAGTCAGCACAGACCTAGAAGG
atatacgaactgcacttcacttaaccatacattgcctctgctttgtaattgtcagGTGGAACGGTCTAGCAGCTCGTATAGTCAGCACAGACCTAGAAGGCCTCCTCCAGATTTGCCTTCATTGCTTCTTCACGGCCGAATCGTTTATATTGGCA
acttaac putative branch site (score: 18)
tttgtaatt TA-rich tract