1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
gtaaaccatcgattcctcttctgctcctttgttgttgccgccggcgccggatcgatccatccgtcagtccaccggcggctgggggttctctcttgcagttgcgctgccgctcatccacggtcgcggatacattagatggatagctgagtgctgatgcaaacctccaaatttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCATTAAACATGCACCTGCCGGCGTTGCGCTTGCTGCGCCCATGAAGCACC
species | Zea mays |
transcript | GRMZM2G015989_T01 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211446984|gb|FL117892.1|FL117892
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211451233|gb|FL117921.1|FL117921
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211451231|gb|FL117919.1|FL117919
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211449111|gb|FL117908.1|FL117908
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211455494|gb|FL117940.1|FL117940
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211453373|gb|FL117934.1|FL117934
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211453377|gb|FL117938.1|FL117938
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211455500|gb|FL117946.1|FL117946
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211451230|gb|FL117918.1|FL117918
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211453374|gb|FL117935.1|FL117935
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211451222|gb|FL117910.1|FL117910
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGNATCCATCCAG TAGNCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|86472526|gb|DY238896.1|DY238896
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: CCGCCATCTCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211449106|gb|FL117903.1|FL117903
genomic: CCGCCATC-CATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211455506|gb|FL117952.1|FL117952
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211449098|gb|FL117895.1|FL117895
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|6636936|gb|AW261208.1|AW261208
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211455508|gb|FL117954.1|FL117954
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211453370|gb|FL117931.1|FL117931
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211451229|gb|FL117917.1|FL117917
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211455501|gb|FL117947.1|FL117947
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211455503|gb|FL117949.1|FL117949
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211451236|gb|FL117924.1|FL117924
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|31355200|gb|CD439557.1|CD439557
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: CAACCGCCATCCATTCTCCTCCTCCGTTGCA-CTTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211453372|gb|FL117933.1|FL117933
genomic: CAACCGCCATCCATTCTCCTCCTCCGTTGCAGC-TGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211455498|gb|FL117944.1|FL117944
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211449107|gb|FL117904.1|FL117904
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211453375|gb|FL117936.1|FL117936
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211446982|gb|FL117890.1|FL117890
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211455504|gb|FL117950.1|FL117950
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211455507|gb|FL117953.1|FL117953
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTEST: gi|211453368|gb|FL117929.1|FL117929
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTT
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|33090955|gb|CF050949.1|CF050949
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211446986|gb|FL117894.1|FL117894
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGNCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211451226|gb|FL117914.1|FL117914
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211455496|gb|FL117942.1|FL117942
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|47961558|gb|CN844267.1|CN844267
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211451224|gb|FL117912.1|FL117912
genomic: TTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211451227|gb|FL117915.1|FL117915
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211453378|gb|FL117939.1|FL117939
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211455495|gb|FL117941.1|FL117941
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211449102|gb|FL117899.1|FL117899
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211455502|gb|FL117948.1|FL117948
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211455497|gb|FL117943.1|FL117943
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211453366|gb|FL117927.1|FL117927
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: AACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211449101|gb|FL117898.1|FL117898
genomic: AACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211449108|gb|FL117905.1|FL117905
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGNTTCAGCGNTCGGGACCGCCTCCACTTGCGGCEST: gi|211449112|gb|FL117909.1|FL117909
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211451235|gb|FL117923.1|FL117923
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211001976|gb|FL117955.1|FL117955
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGTATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211453371|gb|FL117932.1|FL117932
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211453369|gb|FL117930.1|FL117930
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211453376|gb|FL117937.1|FL117937
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|87155572|gb|DY400361.1|DY400361
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: CGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCEST: gi|211453364|gb|FL117925.1|FL117925
genomic: CGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
cggatacattagatggatagctgagtgctgatgcaaacctccaaatttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCATTAAACATGCACCTGCCGGCGTTGCGCTTGCTGCGCCCATGAAGCACC
tgctgat putative branch site (score: 3)
tttcttgc putative PPT
aaatttctt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaaaccatcgattcctcttctgctcctttgttgttgccgccggcgccggatcgatccatccgtcagtccaccggcggctgggggttctctcttgcagttgcgctgccgctcatccacggtcgcggatacattagatggatagctgagtgctgatgcaaacctccaaatttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGCATTAAACATGCACCTGCCGGCGTTGCGCTTGCTGCGCCCATGAAGCACC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC