Skip to another splice site:
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 5'  3'   		6  
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...ctccttttccttgccgccgagacccaagagagaagggggatggcaggatcacgccgcccatcccatcctatcccctttaatttgctgcatcttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAGAACGTCGTCGCCGCCGCCGCCTCCGGGGACGCCGCGCCAGCGCTTCCCA

Basic information

species Zea mays
transcript GRMZM2G000510_T02
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G000510_T04 (Zea mays), 3'ss of exon 1
lower sequence: LOC_Os11g48040.1 (Oryza sativa), 3'ss of exon 1
-------------------------ctccttttccttgccgccgagaccca-agagagaagggggatggcaggatcacgccgcccatcccatcctatcccctttaatttgctgcatcttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAGAACGTCGTCGCCGCCGCCGCCTCCGGGGAC-GCCGCGCCAGCGCTTCCCA
                         ||||  || ||   | ||    || | |||||| |     || |   ||||  |  |   | ||           |  | ||||| | |  |    ||||| | || || ||||| || || ||||||||||| ||||| ||||||||||||||||| | |||||  |||||| ||  | || || ||  |  ||   ||  
gtatccaatcaatccccttcgatttctccgatttctcctctcctcctcctagagagagcattattataggtagatcgagaagg--aaccagctgacggatcgatgatttggttc--cgatccgcagGTGTGCACGATCCCCCTGGATACGGCCAAGGTGAGGCTTCAGCTGCAGAAGAACGTGGCCGCCGATGCCGCCCCCAAGTACCGCGGCCTCCTCGGCACCG-
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211227505|gb|FL377297.1|FL377297
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATAGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|211415548|gb|FL372632.1|FL372632
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|149014447|gb|EE044057.2|EE044057
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGATG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|78115816|gb|DV534204.1|DV534204
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|93281478|gb|EB673742.1|EB673742
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|89249688|gb|DY621474.1|DY621474
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|31349105|gb|CD433462.1|CD433462
EST:     ATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCTGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: ATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|71447490|gb|DR828540.1|DR828540
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|211234204|gb|FK951232.1|FK951232
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATAGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|149072257|gb|EE160513.2|EE160513
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|211100013|gb|FL396408.1|FL396408
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCA
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCA
EST: gi|148947408|gb|EC892822.2|EC892822
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|93015136|gb|EB640656.1|EB640656
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|211234205|gb|FK951233.1|FK951233
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|211395191|gb|FL388870.1|FL388870
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|211527528|gb|FL409931.1|FL409931
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATAGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|211253778|gb|FL369138.1|FL369138
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|31363588|gb|CD447945.1|CD447945
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|76292715|gb|DV032283.1|DV032283
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|71437391|gb|DR818441.1|DR818441
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|67028232|gb|CO456981.1|CO456981
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|211285989|gb|FL388300.1|FL388300
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|78109062|gb|DV527479.1|DV527479
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|211506968|gb|FL409468.1|FL409468
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|211207011|gb|FL394633.1|FL394633
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATAGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|50333857|gb|CO528983.1|CO528983
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|211209142|gb|FL374139.1|FL374139
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|76291091|gb|DV030659.1|DV030659
EST:     GCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: GCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|211159830|gb|FL401308.1|FL401308
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATAGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|148931428|gb|EC874386.2|EC874386
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|148954532|gb|EC899968.2|EC899968
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|78108615|gb|DV527033.1|DV527033
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|76911479|gb|DV164289.1|DV164289
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|88751922|gb|DY536063.1|DY536063
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAAAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|148986615|gb|EE030385.2|EE030385
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTTGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|76294190|gb|DV033758.1|DV033758
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|148932353|gb|EC875981.2|EC875981
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|76281516|gb|DV021084.1|DV021084
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|211229469|gb|FL370963.1|FL370963
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|149110174|gb|EE293989.2|EE293989
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|71303282|gb|DR787744.1|DR787744
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|71437614|gb|DR818664.1|DR818664
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|50324459|gb|CO519585.1|CO519585
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
EST: gi|31348998|gb|CD433355.1|CD433355
EST:     CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAG                         ATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG
genomic: CCTTCGCCGGACGCTTCACGGCCAGCGCCATCGCAGCATGCTTCGCAGAGgtaactcgtc ... cttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ggatcacgccgcccatcccatcctatcccctttaatttgctgcatcttctcgcagATATGTACCATCCCGCTCGACACGGCCAAGGTCAGGCTCCAGCTGCAGAAGAACGTCGTCGCCGCCGCCGCCTCCGGGGACGCCGCGCCAGCGCTTCCCA
                             ctttaat  putative branch site (score: 4)
                                          catcttctc  putative PPT
                              tttaattt  TA-rich tract