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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...aactgttgttcagtttctttcaatggctttcattttgctttggtgtcatagttaattaccacatgacatgtgtttttgtctgcatcgttttattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGCTTCCTCCAGCAGGCTTTTCAAATCCTTTTGATTTTGGTTCTATGCAAAG

Basic information

species Zea mays
transcript AC215244.3_FGT002
intron # 1
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|148987136|gb|EE030964.2|EE030964
EST:     CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|33101202|gb|CF061162.1|CF061162
EST:     CCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCTAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|148960887|gb|EE011568.2|EE011568
EST:     CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|61119717|gb|DN560678.1|DN560678
EST:     CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAATATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|211029954|gb|FL292225.1|FL292225
EST:     CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAATATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|211029957|gb|FL292228.1|FL292228
EST:     CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAATATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|91877255|gb|EB407212.1|EB407212
EST:     CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|67014523|gb|CO443272.1|CO443272
EST:     CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAATATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|211029955|gb|FL292226.1|FL292226
EST:     CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAATATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|33091086|gb|CF051080.1|CF051080
EST:     CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|32829236|gb|CD968914.1|CD968914
EST:     CCGCCCGGATCTACTG                         ATGAGAAGAAAACTCCAAAATCCGAAGGATCTTCCGACGAACGTCAAGGGC
genomic: CCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|20802913|gb|BQ293963.1|BQ293963
EST:     CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|22543322|gb|BU093760.1|BU093760
EST:     CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|149101806|gb|EE287398.2|EE287398
EST:     CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|148991451|gb|EE032956.2|EE032956
EST:     CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|32829793|gb|CD969471.1|CD969471
EST:     CCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|149096549|gb|EE182298.2|EE182298
EST:     CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|149073854|gb|EE162176.2|EE162176
EST:     CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|32915071|gb|CF019883.1|CF019883
EST:     CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|149110681|gb|EE190549.2|EE190549
EST:     CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|149031642|gb|EE286361.2|EE286361
EST:     CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|211029958|gb|FL292229.1|FL292229
EST:     CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAATATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|32830286|gb|CD969964.1|CD969964
EST:     CCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|22133691|gb|BQ833852.1|BQ833852
EST:     CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTG                         ATGATTAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGG
genomic: CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGA-GAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGG
EST: gi|148956070|gb|EC901821.2|EC901821
EST:     CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|148986784|gb|EE030580.2|EE030580
EST:     CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|93282045|gb|EB674309.1|EB674309
EST:     CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|149100032|gb|EE186084.2|EE186084
EST:     CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|149089140|gb|EE178326.2|EE178326
EST:     CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|78115069|gb|DV533457.1|DV533457
EST:     CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|87152225|gb|DY397014.1|DY397014
EST:     CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|32850436|gb|CD990117.1|CD990117
EST:     CGTCGAGTGGGNATCCGCCCGGATCTGCTG                         ATGAGAAGANAACTCCAAAATCCGAAGGGTCTTCCGACGACCGTCAAGGGC
genomic: CGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|149096548|gb|EE182297.2|EE182297
EST:     CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|148934581|gb|EC878630.2|EC878630
EST:     CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|32829506|gb|CD969184.1|CD969184
EST:     CCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAAAATCCGAA-GGTCTTCCGACGAACGTCAAGGGC
genomic: CCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
EST: gi|71428233|gb|DR809283.1|DR809283
EST:     CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTG                         ATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC
genomic: CCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 590

AAGAGCTAAGTCGCCTCGAATTCTTCCCAGCTAGTAGCGTGTGCCGTACCCCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGCTTCCTCCAGCAGGCTTTTCAAATCCTTTTGATTTTGGTTCTATGCAAAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 884

AAGAGCTAAGTCGCCTCGAATTCTTCCCAGCTAGTAGCGTGTGCCGTACCCCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGCTTCCTCCAGCAGGCTTTTCAAATCCTTTTGATTTTGGTTCTATGCAAAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 609

AAGAGCTAAGTCGCCTCGAATTCTTCCCAGCTAGTAGCGTGTGCCGTACCCCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGCTTCCTCCAGCAGGCTTTTCAAATCCTTTTGATTTTGGTTCTATGCAAAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 638

AAGAGCTAAGTCGCCTCGAATTCTTCCCAGCTAGTAGCGTGTGCCGTACCCCGTCGCTCAACCGGGATGGCGTCGAGTGGGGATCCGCCCGGATCTGCTGgtgagcgcgc ... tattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGCTTCCTCCAGCAGGCTTTTCAAATCCTTTTGATTTTGGTTCTATGCAAAG




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tcatagttaattaccacatgacatgtgtttttgtctgcatcgttttattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGCTTCCTCCAGCAGGCTTTTCAAATCCTTTTGATTTTGGTTCTATGCAAAG
    agttaat  putative branch site (score: 638)
 ttttatttt  putative PPT
 ttttatttt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
aactgttgttcagtttctttcaatggctttcattttgctttggtgtcatagttaattaccacatgacatgtgtttttgtctgcatcgttttattttgcagATGAGAAGAAAACTCCAAAATCCGAAGGGTCTTCCGACGAACGTCAAGGGCTTCCTCCAGCAGGCTTTTCAAATCCTTTTGATTTTGGTTCTATGCAAAG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- -tgttgtt
- - - - - - - - - - - - - - - - ttttgct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cacatga