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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtctggcagcagcagcgacggattagggggtagcccgcccaatcgctactcctcccgcggcgcggcagattgaggtggtggagggggcggtggcagtggcgggaggttccacccttaccgtggttcttccgactattctagCGGCGGTGGGACTGGGACACTGGCACCGTCAAATTAGAGTTTCATTCAGGACATGGCGGCAATGTGTTCCAGGCACGGTTCATGCCCTGCTCAGACGATC

Basic information

species Zea mays
transcript AC209819.3_FGT007
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gcggtggcagtggcgggaggttccacccttaccgtggttcttccgactattctagCGGCGGTGGGACTGGGACACTGGCACCGTCAAATTAGAGTTTCATTCAGGACATGGCGGCAATGTGTTCCAGGCACGGTTCATGCCCTGCTCAGACGATC
                         cccttac  putative branch site (score: 3)
                                              ctattct  putative PPT
                                               tattcta  TA-rich tract