1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtttgttttctcgtccctatttctttatgcccatttgtatggtagatggtggatattcacacacaacccttcacagtcttcctcatagctaatacgtcaccatttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGAGGCTGATGCAGGAAGCATATCAGAGAGGCAGTGCAGATAACATTACCT
species | Vitis vinifera |
transcript | Vv04s0008g07320.t01 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|351049231|gb|FQ449953.1|FQ449953
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAAEST: gi|351042063|gb|FQ456273.1|FQ456273
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAA
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCCGACCEST: gi|351012818|gb|FQ430381.1|FQ430381
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACC
EST: GTTTCTTATCCTTGCCAGTGATGGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACEST: gi|351032248|gb|FQ460505.1|FQ460505
genomic: GTTTCTTATCCTTGCCAGTGATGG-ACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAAC
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCGATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|34548353|gb|CF516585.1|CF516585
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|351043099|gb|FQ451272.1|FQ451272
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|46917628|gb|CN546957.1|CN546957
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|110357829|gb|EC921601.1|EC921601
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|32246155|gb|CD711974.1|CD711974
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|32245610|gb|CD711429.1|CD711429
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTTTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|351045561|gb|FQ440746.1|FQ440746
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|352794348|gb|FQ481579.1|FQ481579
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|351040277|gb|FQ425363.1|FQ425363
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAAGCTGTCCCAATGATCAAACCAATCCCAGACCCAEST: gi|351012750|gb|FQ430313.1|FQ430313
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCA
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCCAACCAATCEST: gi|351054667|gb|FQ456864.1|FQ456864
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATC
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCCGAGGAGGCAGCAAAGEST: gi|351052837|gb|FQ456565.1|FQ456565
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|110413000|gb|EC978769.1|EC978769
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|349830755|gb|FQ417053.1|FQ417053
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAAGAGGCAGCAAAGEST: gi|351044326|gb|FQ452878.1|FQ452878
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|351055478|gb|FQ442274.1|FQ442274
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|110372684|gb|EC936869.1|EC936869
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|351056642|gb|FQ443269.1|FQ443269
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGGCAGCAA-EST: gi|110414059|gb|EC979882.1|EC979882
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGG-CAGCAAA
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|351048943|gb|FQ449786.1|FQ449786
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCCATCCCAGACCCAGAGGAGGCAGCEST: gi|351027668|gb|FQ446835.1|FQ446835
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGC
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|351054200|gb|FQ450282.1|FQ450282
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|351047281|gb|FQ454892.1|FQ454892
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|352790076|gb|FQ479686.1|FQ479686
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGGTGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|351032995|gb|FQ461884.1|FQ461884
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAAAGGAGGCAGCAAAGEST: gi|351053821|gb|FQ441587.1|FQ441587
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|351041917|gb|FQ456127.1|FQ456127
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAA GAGGCTGGTC-CAATGATCAAACCAATCCEST: gi|351022909|gb|FQ428818.1|FQ428818
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTG-TCGCAATGATCAAACCAATCC
EST: AGTTCCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|27586639|gb|CB009334.1|CB009334
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|110427933|gb|EC994389.1|EC994389
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|351044454|gb|FQ442985.1|FQ442985
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|352786293|gb|FQ478904.1|FQ478904
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAAGCAGCEST: gi|351048606|gb|FQ448880.1|FQ448880
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGC
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|349830841|gb|FQ418149.1|FQ418149
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|352786304|gb|FQ478915.1|FQ478915
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|351052370|gb|FQ455542.1|FQ455542
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGEST: gi|351038034|gb|FQ460776.1|FQ460776
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|351041635|gb|FQ455845.1|FQ455845
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCTGACCCAGAGGEST: gi|351012059|gb|FQ429865.1|FQ429865
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|351038077|gb|FQ460819.1|FQ460819
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCCGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|352798552|gb|FQ480577.1|FQ480577
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCCAAGEST: gi|351043128|gb|FQ451301.1|FQ451301
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAAGAGGCEST: gi|46917517|gb|CN546846.1|CN546846
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGC
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGEST: gi|110696310|gb|EE075070.1|EE075070
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
EST: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG GAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
genomic: AGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAGgtttgttttc ... catttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAG
ttcacacacaacccttcacagtcttcctcatagctaatacgtcaccatttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGAGGCTGATGCAGGAAGCATATCAGAGAGGCAGTGCAGATAACATTACCT
agctaat putative branch site (score: 3)
atttatca TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtttgttttctcgtccctatttctttatgcccatttgtatggtagatggtggatattcacacacaacccttcacagtcttcctcatagctaatacgtcaccatttatcagGAGGCTGTCGCAATGATCAAACCAATCCCAGACCCAGAGGAGGCAGCAAAGAGGCTGATGCAGGAAGCATATCAGAGAGGCAGTGCAGATAACATTACCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT