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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaatttctacatctactatttgtttctgtttcttcaacatcctgtctctgtctcagtgtctcccagccccacagaaaatgaaaaaggaaaaccaatccaaaaccaatctcgcgaaaatcataatgtcatacattggtttgatcccccagactcttgcttctatctttgcttattcattcaattggatttgattgtagGGGGCAGCAACAACATGCTATGTGGCATTGCATCCTGAGGTTAAGGGGACAACCGGCGAATACTTTGCAGACAGTAACATAGCCAAGGGAAGTTCACAAG

Basic information

species Vitis vinifera
transcript Vv16s0050g00760.t01
intron # 7
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

cccccagactcttgcttctatctttgcttattcattcaattggatttgattgtagGGGGCAGCAACAACATGCTATGTGGCATTGCATCCTGAGGTTAAGGGGACAACCGGCGAATACTTTGCAGACAGTAACATAGCCAAGGGAAGTTCACAAG
                                           atttgat  putative branch site (score: 5)
                           ttattcattcaatt  TA-rich tract