1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
...attccaagtttaaagtgtttggatacatcaaattccaggtttttgacagatacaattgattctaagacaagtaactgaaaaaatgtgtttaacgctgcagAGCGATGCTATGGGACATTAGGAAAAGTCAGGAGACTCTTAAACCAGAACCAGTGATCGAGGTGGATGGGCACACGGGCCCAGTAACGCTCTTGCACATG
species | Vitis vinifera |
transcript | Vv14s0108g00070.t01 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
acagatacaattgattctaagacaagtaactgaaaaaatgtgtttaacgctgcagAGCGATGCTATGGGACATTAGGAAAAGTCAGGAGACTCTTAAACCAGAACCAGTGATCGAGGTGGATGGGCACACGGGCCCAGTAACGCTCTTGCACATG
aaaaaatgtgtttaa TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| attccaagtttaaagtgtttggatacatcaaattccaggtttttgacagatacaattgattctaagacaagtaactgaaaaaatgtgtttaacgctgcagAGCGATGCTATGGGACATTAGGAAAAGTCAGGAGACTCTTAAACCAGAACCAGTGATCGAGGTGGATGGGCACACGGGCCCAGTAACGCTCTTGCACATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- -ccaagtt
- - - - - - - -tgtttgg
- - - - - - - - - - - - - atcaaat
- - - - - - - - - - - - - - - - - - - - - - - - gatacaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aagacaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaaaat