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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtacattagaccacctatccaaaccgataatcatctatcttttcaggttctatgtttcacttccaattggaagctgcatatcaacttctgtgtgccttgacctcattcttcatttcttgtttctttcccttatctgatgcagGTTAAAATCAACATCTCTAGTCCAGGTGTGGCACCTGTTACTGTCTAAGTTCTCAACATAGTATTACATTTCGACAACACTCATTCAATCAGAGACTCCA

Basic information

species Vitis vinifera
transcript Vv14s0060g01410.t01
intron # 7
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ctgtgtgccttgacctcattcttcatttcttgtttctttcccttatctgatgcagGTTAAAATCAACATCTCTAGTCCAGGTGTGGCACCTGTTACTGTCTAAGTTCTCAACATAGTATTACATTTCGACAACACTCATTCAATCAGAGACTCCA
                                            atctgat  putative branch site (score: 4)
             cctcattcttcatttc  CT-rich tract
                     ttcattt  TA-rich tract