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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatatcgcagaaccctccttttgtttgtatgtattacaattcagatgctggtttggactcattcattctcactggctaacattatacggtgttgttgatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGGAAGAGCACCATTGTGCTGCACAACACCTGCG

Basic information

species Vitis vinifera
transcript Vv07s0031g00920.t01
intron # 7
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv07s0031g00920.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: LOC_Os03g09250.2 (Oryza sativa), 3'ss of exon 7
gtatatcgcagaaccctccttttgtttgtatgtattacaatt-cag-atgctggtttggactcattcattctcactggctaacattatacggtgttgttgatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGGAAGAGCACCATTGTGCTGCACAACACCTGCG
                 |  |||||   |   |  | |     ||| ||||   |    |   | | | | |    |  ||| | |   |  |||  |   |  ||||||||||||| ||||||||||| |||||||| || ||||| |||||||| || ||||| |||||||| || ||||||||||| || |||||||||||||| |
------------gtttgcaatttgtccatggattcttctgcagcagtatgccattaaaaaaaaacttagttttg--gattaaaacttgtccatgtattc--ttctgcagTATGTGCCGTATGTTGGAGACAGCAAGAGGGCAATGGACGAGTACACCTCAGAGATCTTCATGGGGGGTAAGAGCACCATCGTTCTGCACAACACCTGTG

upper sequence: Vv07s0031g00920.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: LOC_Os10g22450.1 (Oryza sativa), 3'ss of exon 7
gtatatcgcagaaccctccttttgtttgtatgtattacaattcagatgctggtttggactcattcatt-ctcactggctaacattatacggtg-ttgttgat-attgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGGAAGAGCACCATTGTGCTGCACAACACCTGCG
   |     |||| |  ||    |   | |   |||| |   |    |||| |      |   | ||   |   | |||     |||   ||  ||||| ||  ||||||||| | ||||| ||||| || |||||||| |||||||| |||||||| || ||||| |||||||| ||||||| |||||| |||||||||||||||||||
--ctccgatagaatctgcca---gaccgaaaa-attatacccc----gctgatgcacggtggctgatgatttggttgctgtttctattgagtaattgttaattgttgcagTATATTCCATACGTTGGGGACAGCAAGAGGGCCATGGACGAGTACACCTCGGAGATCTTCATGGGAGGGAAGAACACCATCGTGCTGCACAACACCTGCG

upper sequence: Vv07s0031g00920.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: GRMZM2G004528_T03 (Zea mays), 3'ss of exon 7
gtatatcgcagaaccctccttttgtttgtatgtattacaattcagatgctggtttggactcattcattctcactggctaacattatacggtgttgttgatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGGAAGAGCACCATTGTGCTGCACAACACCTGCG
|| | |      | | |||   | |||  |    |  ||   |        ||||  ||  |   |||  || ||   ||| |   ||    ||| ||    ||||||||||||| ||||| ||||| || ||||| || ||||| |||||||| || ||||| |||||||| || ||||||||||| |||||||||||||||||||
gtctgttagctgatcttccacctctttaaaaagctggca---cgtgcagcagtttaaacgtag--atttacattga--aacctgccactcctttgctgca--tgcagTATGTGCCGTATGTGGGAGACAGTAAGAGGGCTATGGACGAGTACACATCAGAGATCTTCATGGGCGGCAAGAGCACCATCGTGCTGCACAACACCTGCG

upper sequence: Vv07s0031g00920.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: GRMZM2G155242_T01 (Zea mays), 3'ss of exon 7
gtatatcgcagaaccctccttttgtttgtatgtattacaattcagatgctggtttggactcattcattctcactggctaacattatacggtgttgttgat--attgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGGAAGAGCACCATTGTGCTGCACAACACCTGCG
                    | |||| |    | || ||  || | |    |||  |||  || ||      | |  | |||||  |   |||   |  |   |||||||||||||| || || ||||| |||||||| || ||||| |||||||| || ||||| |||||||| || |||| |||||| ||||||||||||||||| |
-------------------gtctgttagctgatctttcacctc-gttaaaagtt--gacatatgcaag---gcagatttacattgaaacttgtcactcttttgttgcagTATGTGCCGTACGTGGGAGACAGCAAGAGGGCTATGGACGAGTACACCTCAGAGATCTTCATGGGCGGCAAGAACACCATCGTGCTGCACAACACCTGTG

upper sequence: Vv07s0031g00920.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: GRMZM2G392513_T02 (Zea mays), 3'ss of exon 5
gtatatcgcagaaccctccttttgtttgtatgtattacaattcagatgctggtttggactcattcattctcactggctaacattatacggtgttgttgatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGGAAGAGCACCATTGTGCTGCACAACACCTGCG
|| |||     || | |||   | |||  |    |  ||   ||       ||||  ||  |   |||  || |    ||| |   ||    ||| ||    ||||||||||||| || || ||||| || ||||| || ||||| |||||||| || ||||| ||||||||||| |||| |||||| ||||||||||||||||| |
gtctattagctaatcttccacctctttaaaaagctggca---catgcagcagtttaaacgtag--atttacattaa--aacttgccactcctttgctgca--tgcagTATGTGCCGTACGTGGGAGACAGTAAGAGGGCTATGGACGAGTACACATCAGAGATCTTCATGGGTGGCAAGAACACCATCGTGCTGCACAACACCTGTG

upper sequence: Vv07s0031g00920.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: GRMZM2G071174_T01 (Zea mays), 3'ss of exon 2
gtatatcgcagaaccctccttttgtttgtatgtatta--caattcagatgctggtttggactcattcattctcactggctaacattatacggtgttgttgatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGGAAGAGCACCATTGTGCTGCACAACACCTGCG
                    |  ||  ||    | ||   | ||  | |  ||  |    ||  ||| | ||||  || | |    |  |     | |  || ||||||||  | || || || || || |||||||| || ||||| ||||| || |||||||| ||||||||||| |||| |||||| | |||||||||||||||||
-------------------gtgggtcggtcgacactagctagttgtgtttgtgactgatgctgcttcttgctcaaaggttgatg--aatcatccctat--attttgcagTACATCCCCTACGTGGGTGACAGCAAGAGGGCTATGGACGAGTATACCTCTGAGATCTTCATGGGTGGCAAGAACACCATCGCGCTGCACAACACCTGCG

upper sequence: Vv07s0031g00920.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: GRMZM2G177461_T01 (Zea mays), 3'ss of exon 7
gtatatcgcagaaccctccttttgttt-gtatgtattacaattcagatgctg-gtttggactcattcattctcactggctaacattatacggtgttgttgatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGGAAGAGCACCATTGTGCTGCACAACACCTGCG
     |||      || | | |||||| || |||     | |  |     |   |      ||||   |  | | | | ||     |   | |     |  | ||||||||  | || ||||| || || ||||||||||||||||| || || || || ||||| |||||||| || |||| |||||| ||||||||||||||||| |
----gtcggtcggtccacttgttgtttagtttgtgactgagtctatcccatatatgctacttcatgtttgattaattgttactcaaagttgatccctcttcttttgcagTACATCCCCTATGTGGGTGACAGCAAGAGAGCCATGGACGAATATACCTCCGAGATCTTCATGGGCGGCAAGAACACCATCGTGCTGCACAACACCTGTG

upper sequence: Vv07s0031g00920.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: GRMZM2G145638_T02 (Zea mays), 3'ss of exon 3
gtatatcgcagaaccctccttttgtttgtatgtattacaattcagatgctggtttggactcattcattctcactggctaacattatacggtgttgttgatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGGAAGAGCACCATTGTGCTGCACAACACCTGCG
|| | |      | | |||   | |||  |   ||  ||   ||       ||||  ||  |   |||  || ||   ||| |   ||    ||||||    ||||||||||||| || || |||||||| ||||| || ||||| |||||||| || ||||| || |||||  | |||| ||||||  ||||||||||||||||||
gtctgttagctgaacttccacctctttaaaaagatggca---catgcagcagtttaaacgtag--atttacattga--aacttgccactcatttgttgca--tgcagTATGTGCCGTACGTGGGAGATAGTAAGAGGGCTATGGACGAGTACACATCAGAGATCTTTATGGGCAGCAAGAACACCATCATGCTGCACAACACCTGCG

upper sequence: Vv07s0031g00920.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: GRMZM2G010768_T01 (Zea mays), 3'ss of exon 1
gtatatcgcagaaccctccttttgtttgtatgtattacaattcagatgctggtttggactcattcattctcactggctaacattatacggtgttgttgatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGGAAGAGCACCATTGTGCTGCACAACACCTGCG
 | | |      | | |||   | |||  |    || ||  |       | ||||  ||  |   |||  || ||   ||| |   ||    ||||||    ||||||||||||  || || ||||| || ||||| || ||||| |||||||| || ||||| ||||||||  | |||| |||||| ||||| ||||||||||  |
atttgttagctgatcttccacctctttaaaaagcttgcaggt---gcagtagtttaaacgtag--atttacattga--aacttgccactcatttgttgca--tgcagTATGTGCTGTACGTGGGAGACAGTAAGAGGGCTATGGACGAGTACACATCAGAGATCTTCATGGGCAGCAAGAACACCATCGTGCTACACAACACCTATG

upper sequence: Vv07s0031g00920.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: GLYMA18G02210.4 (Glycine max), 3'ss of exon 7
gtatatcgcagaaccctccttttgtttgtatgtattacaattcagatgctggtttggactcattcattctcactggctaacattatacggtgttgttgatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGGAAGAGCACCATTGTGCTGCACAACACCTGCG
                       || | | ||| | ||   |      ||  ||    ||   || |      |   | |   |||  | | ||||||   |||||||||||||| || || || |||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||  |||||||||| || |
-----------------------gtatatttgtttcacccatttttcactattt----ctttctcttgtcaggtctttgattctatctgct-ttgttgcctttgcagTATGTGCCTTACGTAGGGGATAGCAAGAGAGCCATGGATGAGTACACTTCAGAGATATTCATGGGTGGAAAGAACACCATTGTTTTGCACAACACATGTG

upper sequence: Vv07s0031g00920.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: GLYMA05G31450.4 (Glycine max), 3'ss of exon 4
gtatatcgcagaaccctccttttgtttgtatgtattacaattcagatgctggtttggactcattcattctcactggctaacattatacggtgttgttgatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGGAAGAGCACCATTGTGCTGCACAACACCTGCG
           ||   |  || | ||| ||| | |    | | |    ||  ||   | ||| |   |     |   | ||| | |  ||| || ||| | |||||||| ||||| ||||| || || |||||||| |||||||||||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| || |
---------gtaattttttttatttttttatttttagtcact-actccctctttcaaattcaattggttattttt-ttgacacttt--ggt-ttattgtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGAAAGAACACAATTGTGTTGCACAACACATGTG

upper sequence: Vv07s0031g00920.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: GLYMA08G14670.3 (Glycine max), 3'ss of exon 6
gtatatcgcagaaccctccttttgtttgtatgtattacaattcagatgctggtttggactcattcattctcactggctaacattatacggtgttgttgatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGGAAGAGCACCATTGTGCTGCACAACACCTGCG
          | |   |   ||| |    |   | |    |||| || |    ||||  |  || ||| | |||       | |  |     || ||| | ||||||||||| || || ||||| || |||||||| ||||||||||||||| ||||||||||||||||||| || |||| ||| |||||| |||||||||| || |
----------gtaatttttatttttagtcactcactctctttcaaattcaa--ttgg--ttctttatt-tgactcttcggtaattaat----ttattggttttgcagTATGTACCTTACGTTGGGGACAGCAAGAGGGCCATGGATGAGTACTCTTCTGAGATATTCATGGGCGGAAAGAACACAATTGTGTTGCACAACACTTGTG

upper sequence: Vv07s0031g00920.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: GLYMA18G02210.3 (Glycine max), 3'ss of exon 7
--gtatatcgcaga-accctccttttgtttgtatgtattacaattcagatgctggtttggactcattcattctcactgg-ctaacattata-cggtgttgttgatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGGAAGAGCACCATTGTGCTGCACAACACCTGCG
  | | ||| |    |   |  | || ||    | ||||    ||||     |  |    | |  ||  |  |  | || ||   ||| || | |  ||||||   |||||||||||||| || || || |||||||||||||||||||||||||||||||| |||||||||||||||                                  
gtgaacatcccgaccatgttgttgttattaaggtatatt-tgtttcacccatttttcactatttctttctcttgtcagGTCTTTGATTCTATCTGCTTTGTTGCCTTTGCAGTATGTGCCTTACGTAGGGGATAGCAAGAGAGCCATGGATGAGTACACTTCAGAGATATTCATGGGT----------------------------------

upper sequence: Vv07s0031g00920.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: AT5G10170.1 (Arabidopsis thaliana), 3'ss of exon 7
gtatatcgcagaaccctccttttgtttgtatgtattacaattcagatgctggtttggactcattcattctcactggctaacattatacggtgttgttgatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGGAAGAGCACCATTGTGCTGCACAACACCTGCG
                      || ||   | || ||  | | |  |  |  |     || |   || | || |  |  | |||||||  | | | || | |||||||||||||||| ||| ||||| ||||||||||| |||||||| ||||| || |||||||||||||| ||||||| ||| |||||| |||||||||| || |
---------------------gtgattaattttactattaatta--taattatccaatctaacaaat-cacattaacataaattatactat-tggatggtgttgcagTATGTGCCATGTGTAGGAGACAGCAAGAGAGCAATGGATGAATACACATCAGAGATATTCATGGGAGGGAAGAACACGATTGTGATGCACAACACTTGTG

upper sequence: Vv07s0031g00920.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: AT2G22240.1 (Arabidopsis thaliana), 3'ss of exon 5
gtatatcgcagaaccctccttttgtttgtatgtattacaattcagatgctggtttggactcattcat-tctcactggctaacattatacggtgttgttga---tattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGGAAGAGCACCATTGTGCTGCACAACACCTGCG
                   |||   |   | |    |    |||  | ||  |||    | |   |  | | |  | || | ||  | |  |  |  |||   | ||||||||||||||||||||||  ||||| || ||||| |||||||||||||| ||||||||||||||||| |||| || ||| || ||| |||| ||||| || |
------------gtttgattttgaatcagaggccagagtgatcaattcctcctttctttttaagtacattttaaagtcttaaatcctgctattgttctgaatgttttgcagTATGTGCCATATGTTGCGGATAGTAAAAGAGCAATGGATGAGTACACGTCTGAGATATTCATGGGAGGGAGGAACACTATAGTGTTGCATAACACTTGTG

upper sequence: Vv07s0031g00920.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: AT4G39800.1 (Arabidopsis thaliana), 3'ss of exon 7
gtatatcgcagaaccctccttttgtttgtatgtattacaattcagatgctggtttggactcattcattctcactggctaacattatacggtgttgttgatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGGAAGAGCACCATTGTGCTGCACAACACCTGCG
||| || | ||||||   |          |   | |  ||  | | | |||  ||||     |    || || ||    |  || |       ||||  | ||| ||||||| || |||||||  ||||| ||| |||||||||| |||||||| || |||||||||||||| ||||||| ||| |||||| ||||||| |||||||
gtaaatag-agaaccggac----------agacactcaaaacctgtttctg--ttggcaatctgagatcccattgatccaatttgtg------tgtttgttttgtagTATGTACCGTATGTTGCGGATAGTAAGCGAGCCATGGACGAGTACACATCAGAGATATTCATGGGAGGGAAGAACACAATTGTGATGCACAATACCTGCG

upper sequence: Vv07s0031g00920.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: PP1S55_204V6.1 (Physcomitrella patens), 3'ss of exon 6
------------------gtatatcgcaga-accctccttttgtttgtatgtattacaattcagatgctggtttggactcattcattctcactggctaacatt------atacggtgttgttgata----ttgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGGAAGAGCACCATTGTGCTGCACAACACCTGCG
                         ||||  |   |  |   |    |  |  ||  | ||||||  |    |||    ||||||  |  | |  | ||  ||      |  |    |   |||       ||||||| || || ||||| || || |||||||| || ||||| ||||||||||| ||||| |||||||| ||    | ||| || ||  ||||||| || ||||
gtattcttatctctactccagccctgcagtcaatgttttcaagccatttcggctttgatttcagactccaagttgtctgcattcacaccgattctcgaatcttcctcttaaccaaaatcaatgacggcgtctgcagTACGTCCCTTATGTGGGTGACAGCAAGAGGGCAATGGACGAGTACACTTCGGAGATCTTCATGGGCGGACGTAACACAATCGTCATGCACAATACGTGCG

upper sequence: Vv07s0031g00920.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: EFJ37320 (Selaginella moellendorffii), 3'ss of exon 7
gtatatcgcagaaccctccttttgtttgtatgtattacaattcagatgctggtttggactcattcattctcactggctaacattatacggtgt-tgttgatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGGAAGAGCACCATTGTGCTGCACAACACCTGCG
                                                 |       || | |   || |  || |  || | |     || |   ||  | ||  ||||||| || || || || ||||||||| | |||||||| || ||||| || |||||||||||||| || | ||||||||| |   |||||||||| ||||
------------------------------------------------gtaaaacaaacgcttgatttttttctagggaaaactcccgagtttgctttcgttttctagTATGTTCCTTACGTCGGTGATAGCAAGCGGGCCATGGACGAATACACGTCCGAGATATTCATGGGAGGCAGGAGCACCATCGCCATGCACAACACTTGCG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|110380748|gb|EC946038.1|EC946038
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGACAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|110380224|gb|EC945471.1|EC945471
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGACAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|27581907|gb|CB004602.1|CB004602
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|110371149|gb|EC934944.1|EC934944
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGACAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|18458737|gb|BM437015.1|BM437015
EST:     CTATCCTGTATGAGCCTGNGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAG
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAG
EST: gi|110729372|gb|EE105268.1|EE105268
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|110703366|gb|EE080147.1|EE080147
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|18458132|gb|BM436410.1|BM436410
EST:     CTATCCTGTATGAGCCTGNGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTA
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTA
EST: gi|27584208|gb|CB006903.1|CB006903
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|110392888|gb|EC957465.1|EC957465
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGACAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|33405434|gb|CF211061.1|CF211061
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGACAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|27580032|gb|CB002727.1|CB002727
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|351016826|gb|FQ424253.1|FQ424253
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGACAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|110687646|gb|EE065294.1|EE065294
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|29784522|gb|CB345364.2|CB345364
EST:     CTATCCTGTATGAGCCTGGGGAGTACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGACAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|30295971|gb|CB972765.1|CB972765
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCG-G                         A
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcag-
EST: gi|30295971|gb|CB972765.1|CB972765
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCG-G                         A
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcag-
EST: gi|294966526|gb|GW837661.1|GW837661
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|34546447|gb|CF514679.1|CF514679
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGACAGCAAGAGAGCCATGGATGAGTACACTTTT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|110698809|gb|EE076731.1|EE076731
EST:     GTGGTCATCAAG                         TATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: GTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|110367003|gb|EC930923.1|EC930923
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGACAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|110686165|gb|EE063519.1|EE063519
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|110715508|gb|EE093637.1|EE093637
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|110699239|gb|EE076063.1|EE076063
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|30327700|gb|CD010962.1|CD010962
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|225387940|gb|GO307571.1|GO307571
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGACAGCAAGAGAGCCATGGATGAGT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGT
EST: gi|110373349|gb|EC937577.1|EC937577
EST:     GAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGACAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: GAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|110373310|gb|EC937535.1|EC937535
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGACAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|110685059|gb|EE063046.1|EE063046
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGACAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|156736210|gb|EV240331.1|EV240331
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGAATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|110426355|gb|EC992761.1|EC992761
EST:     ATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: ATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|28966389|gb|CB345422.1|CB345422
EST:     CTATCCTGTATGAGCCTGGGGAGTACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGACAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|18458241|gb|BM436519.1|BM436519
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|110707572|gb|EE084125.1|EE084125
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|33407001|gb|CF212628.1|CF212628
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGACAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|27581095|gb|CB003790.1|CB003790
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|110706220|gb|EE081554.1|EE081554
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|110394196|gb|EC958827.1|EC958827
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGACAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|110393199|gb|EC958269.1|EC958269
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGACAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|83274450|gb|DV938547.1|DV938547
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGACAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|110697958|gb|EE075424.1|EE075424
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGGGGTGGGCATCAAG                         TATGTGCCATATGGTGGAGATAGCAAGAGAG
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAG
EST: gi|71871789|gb|DT020844.1|DT020844
EST:     GGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGACAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: GGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|27580245|gb|CB002940.1|CB002940
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|30327647|gb|CD010909.1|CD010909
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|34550186|gb|CF518404.1|CF518404
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGACAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|110704772|gb|EE081830.1|EE081830
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|18458286|gb|BM436564.1|BM436564
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|32268348|gb|CD717507.1|CD717507
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|29784589|gb|CB345506.2|CB345506
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGACAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|110699378|gb|EE076322.1|EE076322
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|110426092|gb|EC992489.1|EC992489
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGACAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|110415028|gb|EC980897.1|EC980897
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGACAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|110396188|gb|EC961869.1|EC961869
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGACAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|110730377|gb|EE107389.1|EE107389
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|110398285|gb|EC964538.1|EC964538
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGACAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|32268456|gb|CD717615.1|CD717615
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|110420851|gb|EC987136.1|EC987136
EST:     GCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGACAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: GCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|110390762|gb|EC955689.1|EC955689
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGACAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|34547806|gb|CF516038.1|CF516038
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATTGTTGGGAGACAGCAAGAGAGCCATGGATGAGTACACTT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATAT-GTTGG-AGATAGCAAGAGAGCCATGGATGAGTACACTT
EST: gi|32249601|gb|CD715420.1|CD715420
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCT
EST: gi|18459650|gb|BM437928.1|BM437928
EST:     CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAG                         TATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATG
genomic: CTATCCTGTATGAGCCTGGGGAGCACCCTGACCATGTGGTGGTCATCAAGgtatatcgca ... gatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tttggactcattcattctcactggctaacattatacggtgttgttgatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGGAAGAGCACCATTGTGCTGCACAACACCTGCG
                         taacattata  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtatatcgcagaaccctccttttgtttgtatgtattacaattcagatgctggtttggactcattcattctcactggctaacattatacggtgttgttgatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGGAAGAGCACCATTGTGCTGCACAACACCTGCG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGCTGC