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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagtaatttcctaggcttttgttgttagtggtttggagttccacttcgtggcatatgctttttggtgtgctttgacatgtgtctgtcacctccctcttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCGGTGGAGCTCAAGGTGGGCAAACTGACATAGATATTCAG

Basic information

species Vitis vinifera
transcript Vv07s0005g01530.t01
intron # 7
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv07s0005g01530.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: LOC_Os03g19510.1 (Oryza sativa), 3'ss of exon 7
gtaagtaatttcctaggcttttgttgttagtggtttggagttccacttcgtggcatatgctttttggtgtgctttgaca-tgtgtctgtcacctccctcttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCGGTGGAGCTCAAGGTGGGCAAACTGACATAGATATTCAG
    ||||||   | |  | ||  ||  |||  |       |  | |      | ||  ||  |  |  | |||  | | |||   ||| |         ||||   ||| ||  |||| ||||| || |||||||| || ||||||||||| |||||||| ||||| |||||     | |||||  | || || |||
----gtaattgagt-gattgttaatgcaagtactaca----tttattctacaac-tagactgatctgaatccttgaatactgtacttgtgaatg------taac-acagGGAAGCGATACAGCTTACCTAACTCAAGAATAATGATCCATCAACCTCTCGGAGGAGCCCAAGGACAAGAGACTGATCTTGAGATCCAG

upper sequence: Vv07s0005g01530.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: GRMZM2G121456_T03 (Zea mays), 3'ss of exon 7
gtaagtaatttcctaggcttttgttgttagtggtttggagttccactt---cgtggcatatgctttttggtgtgctttgacatgtgtc-tgtcacc--tccctcttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCGGTGGAGCTCAAGGTGGGCAAACTGACATAGATATTCAG
                |     || || | || |    |  | ||  |    || || ||    |    |  | | || | |   ||| |   |||  |     |  | || ||||||  |||| ||||| |||||||||||||| ||||||||||| ||||| || || || |||||   | | |||||  | || ||||||
----------------gtaccagtagtgattgctaataaaatacatgtaggtgtagcttacatatccaagctt-cgttaatagaagtcataaaaccggtgaaaatataatgcagGAAAGCGATACAGCTTACCAAACTCAAGGATAATGATCCATCAACCTCTTGGAGGGGCCCAAGGACAGGAGACTGATCTTGAGATTCAG

upper sequence: Vv07s0005g01530.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: GLYMA02G01510.2 (Glycine max), 3'ss of exon 7
--------------------------------gtaagtaatttcctaggcttttgttgttagtggtttggagttccacttcgtggca-tatgctttttggtgtgctttgacat-gtgtctgtcacctccctcttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCGGTGGAGCTCAAGGTGGGCAAACTGACATAGATATTCAG
                                     ||    |     ||||  |||||  ||  |   | || ||| ||  |  | || |     || |    | | || |  | ||  |  ||||  ||    |||||||||| ||||| ||||||||||| |||||||| ||||| ||||| || || ||||| |||||||| ||||||||||||||||||||||||
gtattcttttaacatgcaatcagtgtatccatccccctatcccctctctctttctttgttgatgaatgtcattttcacctctcgaaaataagaaaaatgcttctttctaactttatatccctt-cctctttcacttctgaagGAAAGAGATACAGCTTGCCAAATTCAAGGATAATGATTCATCAACCGCTTGGTGGTGCTCAAGGAGGGCAAACTGACATAGATATTCAG

upper sequence: Vv07s0005g01530.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: GLYMA10G01550.2 (Glycine max), 3'ss of exon 7
------------------------gtaagtaatttcctaggcttttgttgttagtggtttggagttccacttcgtggca-tatgctttttggtgtgctttgacat-gtgtctgtcacctccctcttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCGGTGGAGCTCAAGGTGGGCAAACTGACATAGATATTCAG
                        |||  || |  ||    ||||  |||||  ||  |   | ||||||||| ||  | |  |  |  || |    | | || |  | ||  |  ||||| ||    |||||||||| ||||| ||||||||||| |||||||| ||||| ||||| || || ||||| |||||||| ||||||||||||||||||||||||
gtattcttttaacatgcaatcgctgtatcta-tccccccctctttctttgttgatgaatgccatttccacttcttgaaaattagaataatgcttctttctaactttatatccctt-cctccttcacttctgaagGAAAGAGATACAGCTTGCCAAATTCAAGGATAATGATTCATCAACCGCTTGGTGGTGCTCAAGGAGGGCAAACTGACATAGATATTCAG

upper sequence: Vv07s0005g01530.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: GLYMA19G40480.1 (Glycine max), 3'ss of exon 7
------------------------------gtaagtaatttcc---taggcttttgttgttagtggtttggagttccac---ttcgtggcatatgctttttggtg-tgctttgacatgtgtctgtcacctccctcttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCGGTGGAGCTCAAGGTGGGCAAACTGACATAGATATTCAG
                              ||   | ||||     |    |||| || || ||| ||   | ||||     |||  |  | | |     || |  | ||  |   |   | | |  ||  |||     |||||||||| ||||||||||||||||| |||||||| ||||| || || || || |||||||||||||| || ||||||||||||||||| |||
gtaatgattcttttaacttgcagtcattttgttccttatttttgtttttttttttttttttggtgtttctcatttccctgttttctcgataaaagaaaaatgcttcttctaagttctaattttatatccctccttacttctgaagGAAATAGATATAGCTTGCCAAATTCAAGGATAATGATTCACCAACCGCTTGGTGGAGCTCAAGGAGGACAAACTGACATAGATATACAG

upper sequence: Vv07s0005g01530.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: GLYMA03G37880.1 (Glycine max), 3'ss of exon 6
------------------------------------------------------------------------------------gtaagtaat--ttcctaggcttttgttgttagtggtttggagttccacttcgtggcatatgctttttggtgtgctttgacatgtgtctgtcacctccctcttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCGGTGGAGCTCAAGGTGGGCAAACTGACATAGATATTCAG
                                                                                     || ||| |  |||||    |||  || || ||| ||   | ||||   |  |  ||            ||    ||   |  ||  | || | ||| |  |  |||||||||| ||||||||||||||||| |||||||| ||||| || || || ||  ||||    ||||| || |||||||||||||||||||||
gtaatgattcttttaccatgagcagtaagggtgcttttctgctcagtgcagggactaaaggtaatgattcttttaaaagtcattatatgtatttgttccttatttttgttttttggtgtttctcatttccctgttttctcaataaaagaaaaatgcttcttctaacatga-tatcccttccttactt-ctgaagGAAAGAGATATAGCTTGCCAAATTCAAGGATAATGATTCACCAACCGCTTAGTGG---CCAAGGAGGACAAACTGACATAGATATTCAG

upper sequence: Vv07s0005g01530.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: AT1G02560.1 (Arabidopsis thaliana), 3'ss of exon 7
gtaagtaatttcctaggcttttgttgttagtggtttggagttccacttcgtggcatatgctttttggtgtgctttgacatgtgtctgtcacctccctcttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCGGTGGAGCTCAAGGTGGGCAAACTGACATAGATATTCAG
    ||| | || ||  | |||    | | | ||    |  |     |   | | ||||  |||   | |  | |||  || |||   |      |    ||||| |||||||||||| ||  | |||||||||||||| |||||||||||||| || ||||||||||||||||| ||||| ||||| || ||||||
----gtagtctcttaatccttt-caatcattagtaaaaatcttttagtgaagtcttatgaatttcatttt--tctgatgtgagtcatgctttattcgtaaaactgtagGAAAAAGATACAGTCTACCAAACTCAAGGATAATGATCCATCAGCCGCTTGGTGGAGCTCAAGGTGGCCAAACCGACATTGACATTCAG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|71876215|gb|DT025270.1|DT025270
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAATTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|351029243|gb|FQ435443.1|FQ435443
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|30132490|gb|CB917829.1|CB917829
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|110707589|gb|EE084158.1|EE084158
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCANCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|351038598|gb|FQ464464.1|FQ464464
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATAATAGCTTGCCAAACTCAAGGATCATG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATA-TAGCTTGCCAAACTCAAGGATCATG
EST: gi|110384364|gb|EC948794.1|EC948794
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|351024186|gb|FQ423609.1|FQ423609
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|351022198|gb|FQ438783.1|FQ438783
EST:     CATGGGAGCATTCCTGCTTAACTGTGGCACCAAGG                         GAAAAAGATATAGC
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGC
EST: gi|351048211|gb|FQ442181.1|FQ442181
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGGTATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|349815979|gb|FQ403620.1|FQ403620
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|352798651|gb|FQ480676.1|FQ480676
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|349824782|gb|FQ414640.1|FQ414640
EST:     CATGGGGGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|351021593|gb|FQ429697.1|FQ429697
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|110362036|gb|EC925543.1|EC925543
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAATTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|351054329|gb|FQ450412.1|FQ450412
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|110378676|gb|EC943818.1|EC943818
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|110691867|gb|EE070457.1|EE070457
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|351024764|gb|FQ430589.1|FQ430589
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|349822594|gb|FQ412858.1|FQ412858
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|30322095|gb|CD005357.1|CD005357
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|351031646|gb|FQ459903.1|FQ459903
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|352794509|gb|FQ481742.1|FQ481742
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|351047968|gb|FQ441140.1|FQ441140
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCA
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|351056306|gb|FQ454167.1|FQ454167
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|34544227|gb|CF512459.1|CF512459
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAA-GATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|30321427|gb|CD004689.1|CD004689
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|351047409|gb|FQ451921.1|FQ451921
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|352798669|gb|FQ480694.1|FQ480694
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|351030360|gb|FQ432298.1|FQ432298
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|71875459|gb|DT024514.1|DT024514
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|110379552|gb|EC944757.1|EC944757
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|349820976|gb|FQ408684.1|FQ408684
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|32249589|gb|CD715408.1|CD715408
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|349817517|gb|FQ407307.1|FQ407307
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|110697956|gb|EE075414.1|EE075414
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|349821228|gb|FQ408815.1|FQ408815
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|110712884|gb|EE088319.1|EE088319
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAAG                         GAAAAAGATATAGCTTGCCAAACTCAAAGATCATGATCCATCANCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|351049128|gb|FQ449850.1|FQ449850
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|351027334|gb|FQ444583.1|FQ444583
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|349826886|gb|FQ418977.1|FQ418977
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAAGATCATGATCCATCATGC-TCTC
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCA-GCCTCTC
EST: gi|110362844|gb|EC926401.1|EC926401
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAATTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|351029664|gb|FQ427504.1|FQ427504
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|110709053|gb|EE084177.1|EE084177
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCAC-AAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|351016793|gb|FQ424220.1|FQ424220
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|29781945|gb|CB346812.2|CB346812
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|351037597|gb|FQ462580.1|FQ462580
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|349811409|gb|FQ407635.1|FQ407635
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|349826256|gb|FQ416061.1|FQ416061
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|351012618|gb|FQ430181.1|FQ430181
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|71859900|gb|DT008955.1|DT008955
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAAC
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAAC
EST: gi|349825647|gb|FQ421746.1|FQ421746
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|349825899|gb|FQ423194.1|FQ423194
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|351023787|gb|FQ448338.1|FQ448338
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|349811516|gb|FQ409512.1|FQ409512
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|349810214|gb|FQ401660.1|FQ401660
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCCAGG                         GNNNNNNNTATAGCTTGCCAAACTCAAGGATCATGATCCCTCAGCCTTCTC
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCT-CTC
EST: gi|32267449|gb|CD716412.1|CD716412
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCCAACTCAAGGATCATGATCCATCAGCCTCT
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCT
EST: gi|349826725|gb|FQ418816.1|FQ418816
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|110371862|gb|EC935988.1|EC935988
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|27582740|gb|CB005435.1|CB005435
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCNAGGATCATGATCCATCAGCCTCTC
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTC
EST: gi|110373638|gb|EC937892.1|EC937892
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAATTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|351040704|gb|FQ438248.1|FQ438248
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|110423692|gb|EC990043.1|EC990043
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|351051863|gb|FQ455277.1|FQ455277
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|349812565|gb|FQ407184.1|FQ407184
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|349817148|gb|FQ405153.1|FQ405153
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCANCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|110725852|gb|EE102787.1|EE102787
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCANCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|27586643|gb|CB009338.1|CB009338
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|351025638|gb|FQ426652.1|FQ426652
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|32270269|gb|CD719428.1|CD719428
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCCAAACTCA-GGATCATGATCCATCAGCCTCTC
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCC-AAACTCAAGGATCATGATCCATCAGCCTCTC
EST: gi|110719511|gb|EE094705.1|EE094705
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAAGATCATGATCCATCANCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|110379101|gb|EC944275.1|EC944275
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|351032416|gb|FQ461669.1|FQ461669
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|351037939|gb|FQ465177.1|FQ465177
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|110379281|gb|EC944466.1|EC944466
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|26259816|gb|CA810879.1|CA810879
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|110702673|gb|EE078851.1|EE078851
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAAG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|349818345|gb|FQ409120.1|FQ409120
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|349830682|gb|FQ416980.1|FQ416980
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|349812329|gb|FQ406350.1|FQ406350
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|349807180|gb|FQ401172.1|FQ401172
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|34544144|gb|CF512376.1|CF512376
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAA-GATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|110385597|gb|EC950139.1|EC950139
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAATTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|28962584|gb|CB341617.1|CB341617
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAATTCAAGGATCATG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATG
EST: gi|351048277|gb|FQ442247.1|FQ442247
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|349829184|gb|FQ419680.1|FQ419680
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|83274530|gb|DV938627.1|DV938627
EST:     CATGGGAGCATTCCTGGTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|110720556|gb|EE096582.1|EE096582
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|352798620|gb|FQ480645.1|FQ480645
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|351033794|gb|FQ447832.1|FQ447832
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|351023555|gb|FQ432938.1|FQ432938
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|110361254|gb|EC924714.1|EC924714
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAATTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|349828833|gb|FQ419166.1|FQ419166
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
EST: gi|27580053|gb|CB002748.1|CB002748
EST:     CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGG                         GAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG
genomic: CATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGgtaagtaatt ... ttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

catatgctttttggtgtgctttgacatgtgtctgtcacctccctcttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCGGTGGAGCTCAAGGTGGGCAAACTGACATAGATATTCAG
                                           tcttaac  putative branch site (score: 2)
                              tctgtcacctccctct  CT-rich tract
       ttttt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtaagtaatttcctaggcttttgttgttagtggtttggagttccacttcgtggcatatgctttttggtgtgctttgacatgtgtctgtcacctccctcttaactgaagGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATCAGCCTCTCGGTGGAGCTCAAGGTGGGCAAACTGACATAGATATTCAG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGCTCA