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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...tgctttagatttatgtcattctttgccttctccctccattccaaaactttctgcagaatcagcactaattaatttactggcatttttctgaaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG

Basic information

species Vitis vinifera
transcript Vv04s0008g07320.t01
intron # 7
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv04s0008g07320.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: LOC_Os02g05630.1 (Oryza sativa), 3'ss of exon 6
tgctttagatttatgtcattctttgccttctccctccattcca--aaactttctgcagaatcagcactaattaatttactggcatttttctgaaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG
  | ||   ||||||  |            |    |   ||||  ||  | ||       |   || |   |||   |   |||| ||  |  |  || |||||||| |   | || |||||||| ||||| || |||||||| || |||||||| ||||||||||| |  ||  ||
-tcattgcttttatgcaagaaagcaaacaatgagcctgctccatcaacatatcatttatctttccatttggtaaaagaaatgcatcttgttttat-ttacagGAGGAGATTGTCGATAGCTCCCTTGAGTTCCTCATCCTTGCTAGCGATGGACTTTGGGATGTTGTAAGTAACAAG

upper sequence: Vv04s0008g07320.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: GRMZM5G829894_T03 (Zea mays), 3'ss of exon 1
-------------------------------------------------------------------------------tgctttagatttatgtca--ttctttgccttc----tccctccattccaaaactttctgcagaatcagcac------taattaatttactggcattttt-ctgaaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG
                                                                                | | || | || |   |  | | |     |     | ||  ||||    ||  |  | ||  | |  |||      ||   |  | |     |||||| |||  |    ||||||||   | | ||||||||||| || || || |||||||| ||||||||||| |||||||||||||| ||||||
gtttgtcatgcacttatgttttattacggattgtcgggatagtttttcagacctatcatggtttgagggaatatggtggggttgtaaacttgtaataagtgcctaaaaatggggattccatcatttagcaatgtcatacatcacccacaccccctgtagccatctgaaaacgatttttgctgttacaatcagGAGGAGGTGGTCGACAGCTCCCTTGAATTCCTCATCCTTGCTAGTGATGGACTCTGGGATGTTGTCACTAATGAG

upper sequence: Vv04s0008g07320.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: GRMZM2G056572_T03 (Zea mays), 3'ss of exon 6
tgctttagatttatgtcattctttgccttctccctccattc--caa-aactttctgcagaatcagcactaa--ttaatttactggc-atttttctgaaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG
         || ||    || ||||   | |   |  |  |  ||  | |  | |  |  ||| | |||||  || | ||  ||   |  |||       |   ||||||||    ||||   | | |||||||||||||||||||| |||||||| ||||||||||| ||| | || |||
---------ttaattgttttttttgaaattttgatgaaagcagcagcagcagtattaatgatctgtactaaaattgacttgttgattacatttaatcttgtgataggagGAAGTTGTTGATGACACACTCGAGTTTCTTATCCTTGCAAGTGATGGGCTGTGGGATGTGGTCTCTAACGAG

upper sequence: Vv04s0008g07320.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: GRMZM2G056572_T02 (Zea mays), 3'ss of exon 6
tgctttagatttatgtcattctttgccttctccctccatt--ccaaaactttctgcagaatcagcactaa--ttaatttactggc-atttttctgaaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG
  | ||  |||   ||  || ||    || |      |    |   | |  | |  |  ||| | |||||  || | ||  ||   |  |||       |   ||||||||    ||||   | | |||||||||||||||||||| |||||||| ||||||||||| ||| | || |||
--catttaatt---gttttttttgaaattttgatgaaagcagcagcagcagtattaatgatctgtactaaaattgacttgttgattacatttaatcttgtgatagGAGGAAGTTGTTGATGACACACTCGAGTTTCTTATCCTTGCAAGTGATGGGCTGTGGGATGTGGTCTCTAACGAG

upper sequence: Vv04s0008g07320.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: GRMZM2G166035_T02 (Zea mays), 3'ss of exon 6
--------------------------------------------------------------------------------tgctttagatttatgtc---attctttgccttctccct---ccattccaaaactttctgcagaatcagcactaattaatttactg-gcatttttctgaaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG-------------------------
                                                                                 | ||   ||  ||| |   |  |   |    |  | |   | ||  || |  |  || |  |  |  |  ||   |  | |    |  |||| ||   |    ||||||||   | | ||||||||||| || || || |||||||| || || ||||| |||||||||||||| ||||||                         
gtttgtcatgcatttttgtttttactatggattgcctggatattttttccaaacatatcatggtttgaggaaatatggtgcgtttgtaataaatgcctaaaaacggggatcccatcataagcaatgtcatacatcactcccaacccccctgtagccatctgaaaacggcttttgctattacaatcagGAGGAGGTGGTCGACAGCTCCCTTGAATTCCTCATCCTTGCTAGCGACGGACTCTGGGATGTTGTCACTAATGAGGTACCTACAGATGTTACTAAATATC

upper sequence: Vv04s0008g07320.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: GRMZM2G166035_T01 (Zea mays), 3'ss of exon 6
--------------------------------------------------------------------------------tgctttagatttatgtc---attctttgccttctccct---ccattccaaaactttctgcagaatcagcactaattaatttactg-gcatttttctgaaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG
                                                                                 | ||   ||  ||| |   |  |   |    |  | |   | ||  || |  |  || |  |  |  |  ||   |  | |    |  |||| ||   |    ||||||||   | | ||||||||||| || || || |||||||| || || ||||| |||||||||||||| ||||||
gtttgtcatgcatttttgtttttactatggattgcctggatattttttccaaacatatcatggtttgaggaaatatggtgcgtttgtaataaatgcctaaaaacggggatcccatcataagcaatgtcatacatcactcccaacccccctgtagccatctgaaaacggcttttgctattacaatcagGAGGAGGTGGTCGACAGCTCCCTTGAATTCCTCATCCTTGCTAGCGACGGACTCTGGGATGTTGTCACTAATGAG

upper sequence: Vv04s0008g07320.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: GLYMA06G06310.1 (Glycine max), 3'ss of exon 6
tgctttagattta-tgtcattctttgccttctccctccattccaaaactttctgcagaatcagcactaattaatttactggcatttttctgaaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG
   ||    | || | | |||  |    |   ||||  | ||  |    |  |      |      |   |  || | | |||| ||| | |   |||||||| ||||| |||||||||||||| ||||||||||| || |||||||| || || |||||||||||||||||||||
aatttcttctctactcttattgatgtgatgtgcccttaaatcttatttgtcttttctctttctttttgtatgtttaagttgcatgtttgtcatt-ttgcagGAAGAAAAAATTGACAGCTCCCTTGAGTTTCTTATTCTGGCCAGTGACGGGCTATGGGATGTTGTCACAAATGAG

upper sequence: Vv04s0008g07320.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: GLYMA04G06250.1 (Glycine max), 3'ss of exon 7
-tgctttagatttatgtcattctttgccttctccctccattccaaaactttctgcagaatcagcactaattaatttactggcatttttctgaaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG
 ||  | |  ||      ||||||     | | ||   |   |  |  |||||      |      |   || || | | |||| |||   |   |||||||| |||||  ||||||||||||| ||||||||||| || |||||||| || || |||||||||||| | ||||||
ctgactgatcttctctatattcttattgatgtgcccttaaatcttatttttcttttctttttcatttgtatatttaagttgcatgtttgccatt-ttgcagGAAGAAAAAGTTGACAGCTCCCTTGAGTTTCTTATTCTGGCCAGTGACGGGCTATGGGATGTTGTCTCTAATGAG

upper sequence: Vv04s0008g07320.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: GLYMA17G33690.2 (Glycine max), 3'ss of exon 7
-tgctttagatttatgtcattctttgccttctccctccattccaaaactttctgcagaatcagcactaatta-atttactggcatttttctgaaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG
 || | |  |||  |||     || |  |    | |  |||         ||         ||   || ||| |  ||    ||| ||| ||    |||||||| |||||| |||| ||||| || |||||||||||  | ||||||||||| || |||||||| ||| ||||||||
ctgatctttattcttgttcaaattggtttaagtcgtggatttttttggcctccattcgtgtagt-ttagttacaactaaaaacatgtttgtggtc-ttgcagGAAGAAAAGGTTGATAGCTCTCTTGAGTTTCTTATATTGGCCAGTGATGGGCTATGGGATGTCGTCTCAAATGAG

upper sequence: Vv04s0008g07320.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: GLYMA14G12220.1 (Glycine max), 3'ss of exon 6
-tgctttagatttatgtcattctttgccttctccctccattccaaaactttctgcagaatcagcactaatta--atttactggcatttttctgaaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG
  ||||||   || |   | |   | |    |       ||      ||   | | | || ||   || |||  | | |    ||| ||| ||    |||||||| |||||| |||| ||||| || |||||||||||  | || |||||||| || |||||||||||| ||||||||
gagctttattcttgttcaaattgcttcaagttgtggatttttttggcctccattc-gtattagt-ttagttacaactaaaaaacatgtttgtggtc-ttgcagGAAGAAAAGGTTGATAGCTCTCTTGAGTTTCTTATATTGGCTAGTGATGGGCTATGGGATGTTGTCTCAAATGAG

upper sequence: Vv04s0008g07320.t01 (Vitis vinifera), 3'ss of exon 7
lower sequence: AT4G31750.1 (Arabidopsis thaliana), 3'ss of exon 7
-tgctttagatttatgtcattctttgccttctccctccattccaaaa----ctttctgcagaatcagcactaattaatttactggcatttttctgaaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG
 | |||  |||  |  |||||     | || |       || | | |    |  | | || ||    |  |  || | | | | ||||   |  ||||||| |||||||||||  |||| ||||| ||||||||||| || ||||| |||||||| || ||||| |||||  | || |||
ttactt--gataca-atcattacccacattttagactagtttctagaatggcactttacaaaacttcc-ttcgttcactcattagcataaatg-gaaaatttcagGAGGAAAAAGTTGATAGCTCTCTCGAGTTTCTCATTCTTGCAAGTGATGGTCTCTGGGACGTTGTATCTAACGAG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|351037953|gb|FQ465191.1|FQ465191
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCCGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|351047336|gb|FQ451848.1|FQ451848
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAGAGGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|351049231|gb|FQ449953.1|FQ449953
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCCGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|351042063|gb|FQ456273.1|FQ456273
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCCGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|351012818|gb|FQ430381.1|FQ430381
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGG
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGG-
EST: gi|351032248|gb|FQ460505.1|FQ460505
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAGGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|34548353|gb|CF516585.1|CF516585
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|351043099|gb|FQ451272.1|FQ451272
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAGGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|352789850|gb|FQ478665.1|FQ478665
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|351045009|gb|FQ449263.1|FQ449263
EST:     TTGGTGATGGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|46917628|gb|CN546957.1|CN546957
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|110357829|gb|EC921601.1|EC921601
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|32246155|gb|CD711974.1|CD711974
EST:     GCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: GCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|349827540|gb|FQ422408.1|FQ422408
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAA                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTAT
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTAT
EST: gi|349829612|gb|FQ421130.1|FQ421130
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|32245610|gb|CD711429.1|CD711429
EST:     GCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTTTTATCCTTGCCAGTGATGGA
genomic: GCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|351045561|gb|FQ440746.1|FQ440746
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|349821400|gb|FQ411021.1|FQ411021
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|352794348|gb|FQ481579.1|FQ481579
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCCGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|351040277|gb|FQ425363.1|FQ425363
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCTCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|351012750|gb|FQ430313.1|FQ430313
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|351054667|gb|FQ456864.1|FQ456864
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCCGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|349817052|gb|FQ399799.1|FQ399799
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGACATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCCTGCCCGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|351052837|gb|FQ456565.1|FQ456565
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAGGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|110413000|gb|EC978769.1|EC978769
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|349830755|gb|FQ417053.1|FQ417053
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|351044326|gb|FQ452878.1|FQ452878
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|351028368|gb|FQ427264.1|FQ427264
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTCGTTGCTGATCCAGAAATCCAG                         GAAGAAAAAAT-GACAGCTCCCTCCGAGTTTCT
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTC-GAGTTTCT
EST: gi|351055478|gb|FQ442274.1|FQ442274
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|110372684|gb|EC936869.1|EC936869
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|349830969|gb|FQ418253.1|FQ418253
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTT
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTT
EST: gi|351056642|gb|FQ443269.1|FQ443269
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAGGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|110414059|gb|EC979882.1|EC979882
EST:     TGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|351048943|gb|FQ449786.1|FQ449786
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|351027668|gb|FQ446835.1|FQ446835
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|351054200|gb|FQ450282.1|FQ450282
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAGAGGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|351047281|gb|FQ454892.1|FQ454892
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAGGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|352790076|gb|FQ479686.1|FQ479686
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAGGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGGTGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|351032995|gb|FQ461884.1|FQ461884
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCCGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|351045607|gb|FQ440792.1|FQ440792
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTGTCCTT
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTT
EST: gi|351055896|gb|FQ452361.1|FQ452361
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCCGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCCTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|351040210|gb|FQ425296.1|FQ425296
EST:     TGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAAATCCAG                         GAGGAAAAGATTGACAGCCCCCTCGAGTTTC
genomic: TGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAA-TCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTC
EST: gi|351053821|gb|FQ441587.1|FQ441587
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|351041917|gb|FQ456127.1|FQ456127
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCCGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|352794319|gb|FQ481550.1|FQ481550
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCT
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCT
EST: gi|351022909|gb|FQ428818.1|FQ428818
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTCCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|27586639|gb|CB009334.1|CB009334
EST:     GCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: GCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|110427933|gb|EC994389.1|EC994389
EST:     TGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|351044454|gb|FQ442985.1|FQ442985
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAGGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|352786293|gb|FQ478904.1|FQ478904
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCCGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|351048606|gb|FQ448880.1|FQ448880
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|349830841|gb|FQ418149.1|FQ418149
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|352786304|gb|FQ478915.1|FQ478915
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAGGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|351052370|gb|FQ455542.1|FQ455542
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGATATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|351038034|gb|FQ460776.1|FQ460776
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAGGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|351014237|gb|FQ434826.1|FQ434826
EST:     TGGTGATAGACTCTTGAAGCAAGTACGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCCTGCCAGTGATGGA
genomic: TGGTGATAGACTCTTGAAGCA-GTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|351041635|gb|FQ455845.1|FQ455845
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCCGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|351012059|gb|FQ429865.1|FQ429865
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|351038077|gb|FQ460819.1|FQ460819
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCCGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|352798552|gb|FQ480577.1|FQ480577
EST:     TTGGTGACAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|351043128|gb|FQ451301.1|FQ451301
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCCGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|46917517|gb|CN546846.1|CN546846
EST:     TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
EST: gi|110696310|gb|EE075070.1|EE075070
EST:     TGTTGCTGATCCAGAAATCCAG                         GAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA
genomic: TGTTGCTGATCCAGAAATCCAGgtctggctct ... aaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

actttctgcagaatcagcactaattaatttactggcatttttctgaaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG
                  actaattaatttact  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
tgctttagatttatgtcattctttgccttctccctccattccaaaactttctgcagaatcagcactaattaatttactggcatttttctgaaaattgcagGAGGAAAAGATTGACAGCTCCCTCGAGTTTCTTATCCTTGCCAGTGATGGACTGTGGGATGTTGTCACAAATGAG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GATGGA
- - - - - - - gtcattc
- - - - - - - - - - - -tgccttc
- - - - - - - - - - - - - - - -ccctcca
- - - - - - - - - - - - - - - - - - - - ccaaaac
- - - - - - - - - - - - - - - - - - - - - - - - -tctgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gcactaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttactgg