Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...taccatacgaatttgtttagcagtatgaatatatagattatgaggaatatttgttagttacaattggtggccatcagttgaatttttgatgatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAGCTAAATCGCTACATACCCACTGCTGCAGCCTTCGGGGGTATGTGTATCG

Basic information

species Vitis vinifera
transcript Vv19s0014g01020.t01
intron # 6
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv19s0014g01020.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: LOC_Os09g17840.1 (Oryza sativa), 3'ss of exon 5
------taccatacgaatttgtttagcagtatgaatatatagattatgaggaatatttgttagttacaattggtggccatcagttgaatttttgatgatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAGCTAAATCGCTACATACCCACTGCTGCAGCCTTCGGGGGTATGTGTATCG
      ||   |     |    | |  ||| |  || | |  |     || ||| ||  | |||  | ||   ||  |  || ||     ||||   || |  |||||||||||||||||||||||||| ||||| ||| | ||||||||||| ||  | ||  | ||||| ||||||||||| || || || ||  |||| || |
gatatttagtgttgaggtgatctaattagtctatatttgtttacatacagaaatgttactaagt--ccatctatgaactccattt----ctttgccaatataacagGAACAACAAATGGTGATGCCTGGCCATCGTGAGTCAAACTTGCAGAAGGAATTGAACAGATACATCCCCACTGCTGCTGCATTTGGTGGAGTGTGCATTG

upper sequence: Vv19s0014g01020.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: LOC_Os09g17830.1 (Oryza sativa), 3'ss of exon 5
taccatacgaatttgtttagc-agtatgaatatatagattatgaggaatatttgttagttacaattggtggccatcagttgaattttt--gatgatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAGCTAAATCGCTACATACCCACTGCTGCAGCCTTCGGGGGTATGTGTATCG
  | |||   | | |  ||   ||| |  |  |  |  | ||     ||||| |||   | |||  |    | || |  |  |||| |  |    | |  |||||||| ||||||||||||||||| ||||| ||| | ||||||||||| ||  | ||  | ||||| |||||||| || || || || ||  |||| || |
-tctatatatagtgggatatttagtgttgaggtg-atctaatagtctatattggtttact-caaaggccatctataaactccatttctatgtcactataacagGAACAGCAAATGGTGATGCCTGGCCATCGTGAGTCAAACTTGCAGAAGGAATTGAACAGATACATCCCCACTGCCGCTGCATTTGGTGGAGTGTGCATTG

upper sequence: Vv19s0014g01020.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: GRMZM2G073498_T02 (Zea mays), 3'ss of exon 5
taccatacgaatttgtttagcagtatg-aatatatagattatgaggaatatttgt-tagttacaattggtggccatcagttgaatttttgatgatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAGCTAAATCGCTACATACCCACTGCTGCAGCCTTCGGGGGTATGTGTATCG
|| | |    |  |  |      |||       |   ||||||   | |   | |  |   |  |   |||  ||||   |||     ||   ||| | ||||||||||||||||||||||| || ||||| ||| | ||||||||||| || || || || ||||| ||||||||||| || || || ||  | || ||||
taacgtgttgagctactgttttatatttggctcactaattatgcaaactcactatgcaacaattacctgtgatcatcctctga--cactggatattctgcagGAACAACAAATGGTGATGCCAGGACATCGTGAGTCAAACTTGCAGAAGGAACTGAACCGATACATCCCCACTGCTGCTGCATTTGGTGGAGTATGCATCG

upper sequence: Vv19s0014g01020.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: GRMZM2G130987_T04 (Zea mays), 3'ss of exon 5
taccatacgaatttgtttagcagtatgaatatatagattatgaggaatatttgtta-gttacaattggt--ggccatcagttgaatttttgatgat-ttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAGCTAAATCGCTACATACCCACTGCTGCAGCCTTCGGGGGTATGTGTATCG
||| |||  |  ||  | |    | |  | ||    || | |  ||| ||||| || |   || || |     |  | |     |   | |||  | | | ||||||||||||||||||||||| || ||||| ||| | ||||||||||| || || || || ||||| ||||||||||| || || || ||| | || || |
tacaatataatcttaatgat---ttttcacatgcctatca-gttgaagatttggtatggagcagtttgctaacctgtgatcctgacactggatattatatgcagGAACAACAAATGGTGATGCCAGGCCATCGTGAGTCGAACTTGCAGAAGGAACTTAACCGATACATCCCCACTGCTGCTGCATTTGGTGGTGTATGCATTG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|351031923|gb|FQ460180.1|FQ460180
EST:     GGATTGAAGTATCTGGATCCTCTGCTAGGGATGTGGCTAAGCAGCTCAAG                         GAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
genomic: GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
EST: gi|33410560|gb|CF216187.1|CF216187
EST:     GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAA                         GAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
genomic: GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
EST: gi|71867271|gb|DT016326.1|DT016326
EST:     GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAA                         GAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
genomic: GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
EST: gi|30133629|gb|CB918968.1|CB918968
EST:     GGATTGAAGTATCTGGATCCTCTGCTAGAGATGTGGCTAAGCAGCTCAAG                         GAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
genomic: GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
EST: gi|110362392|gb|EC925922.1|EC925922
EST:     GGATCGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAA                         GAACAACAAATGGTGATGCTTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
genomic: GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
EST: gi|110686843|gb|EE063731.1|EE063731
EST:     GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAA                         GAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
genomic: GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
EST: gi|22010959|gb|BQ795993.1|BQ795993
EST:     GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAA                         GAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
genomic: GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
EST: gi|351019144|gb|FQ429304.1|FQ429304
EST:     GGATTGAAGTATCTGGATCCTCTGCTAGGGATGTGGCTAAGCAGCTCAAG                         GAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
genomic: GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
EST: gi|351047982|gb|FQ441154.1|FQ441154
EST:     GGATTGAAGTATCTGGATCCTCTGCTAGGGATGTGGCTAAGCAGCTCAAG                         GAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
genomic: GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
EST: gi|77577442|gb|DV217453.1|DV217453
EST:     GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAA                         GAACAACAAATGGTGATGCCTGGGCATCGGGAGG
genomic: GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGG
EST: gi|156738579|gb|EV242700.1|EV242700
EST:     GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAA                         GAACAACAAATGGTGATGCCTGNGCATCGGGAGGCCAACTTGCAGAAAGAG
genomic: GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
EST: gi|110717573|gb|EE093550.1|EE093550
EST:     GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAA                         GAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
genomic: GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
EST: gi|110383713|gb|EC948102.1|EC948102
EST:     GGCTAAGCAGCTCAAA                         GAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
genomic: GGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
EST: gi|352786020|gb|FQ481815.1|FQ481815
EST:     GGATTGAAGTATCTGGATCCTCTGCCAGAGACGTGGCTAAGCAGCTCAAA                         GAACAAC-AATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
genomic: GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
EST: gi|110729814|gb|EE106178.1|EE106178
EST:     GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAA                         GA-CAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCA
genomic: GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCA
EST: gi|110403185|gb|EC964476.1|EC964476
EST:     GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAA                         GAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
genomic: GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
EST: gi|30129932|gb|CB915271.1|CB915271
EST:     GGATTGAAGTATCTGGATCCTCTGCTAGAGATGTGGCTAAGCAGCTCAAG                         GAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
genomic: GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
EST: gi|351035066|gb|FQ458423.1|FQ458423
EST:     GGATTGAAGTATCTGGATCCTCTGCTAGGGATGTGGCTAAGCAGCTCAAG                         GAACAACAAATGGTGACGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
genomic: GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
EST: gi|110414122|gb|EC979948.1|EC979948
EST:     GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAA                         GAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
genomic: GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
EST: gi|71865798|gb|DT014853.1|DT014853
EST:     GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAA                         GAACA-CAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
genomic: GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
EST: gi|110379851|gb|EC945072.1|EC945072
EST:     GGCTAAGCAGCTCAAA                         GAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
genomic: GGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
EST: gi|351054782|gb|FQ462812.1|FQ462812
EST:     GGATTGAAGTATCTGGATCCTCTGCTAGGGATGTGGCTAAGCAGCTCAAG                         GAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
genomic: GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
EST: gi|351048096|gb|FQ442066.1|FQ442066
EST:     GGATTGAAGTATCTGGATCCTCTGCTAGGGATGTGGCTAAGCAGCTCAAG                         GAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
genomic: GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
EST: gi|349829389|gb|FQ419921.1|FQ419921
EST:     GGATTGAAGTATCTGGATCCTCTGCTAGGGATGTGGCTAAGCAGCTCAAG                         GAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
genomic: GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
EST: gi|161714004|gb|FC063189.1|FC063189
EST:     GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAA                         GAACAACAAATGGTGATG
genomic: GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATG
EST: gi|351024256|gb|FQ423679.1|FQ423679
EST:     GGATTGAAGTATCTGGATCCTCTGCTAGGGATGTGGCTAAGCAGCTCAAG                         GAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
genomic: GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
EST: gi|110687837|gb|EE065701.1|EE065701
EST:     GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAA                         GAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
genomic: GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
EST: gi|110361033|gb|EC924484.1|EC924484
EST:     GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAA                         GAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
genomic: GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
EST: gi|33403829|gb|CF209456.1|CF209456
EST:     GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAA                         GAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
genomic: GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
EST: gi|351023126|gb|FQ432509.1|FQ432509
EST:     GGATTGAAGTATCTGGATCCTCTGCTAGGGATGTGGCTAAGCAGCTCAAG                         GAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCGACTTGCAGAAAGAG
genomic: GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
EST: gi|71867001|gb|DT016056.1|DT016056
EST:     GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAA                         GAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
genomic: GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
EST: gi|30136336|gb|CB921674.1|CB921674
EST:     GGATTGAAGTATCTGGATCCTCTGCTAGGGATGTGGCTAAGCAGCTCAAG                         GAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
genomic: GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
EST: gi|351029515|gb|FQ436909.1|FQ436909
EST:     GGATTGAAGTATCTGGATCCTCTGCTAGGGATGTGGCTAAGCAGCTCAAG                         GAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG
genomic: GGATTGAAGTATCTGGATCCTCTGCCAGAGATGTGGCTAAGCAGCTCAAAgtatgaattt ... gatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aatatttgttagttacaattggtggccatcagttgaatttttgatgatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAGCTAAATCGCTACATACCCACTGCTGCAGCCTTCGGGGGTATGTGTATCG
                                      ttttgat  putative branch site (score: 4)
                                               tttttc  putative PPT
                                   aatttttgatgatttt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
taccatacgaatttgtttagcagtatgaatatatagattatgaggaatatttgttagttacaattggtggccatcagttgaatttttgatgatttttcagGAACAACAAATGGTGATGCCTGGGCATCGGGAGGCCAACTTGCAGAAAGAGCTAAATCGCTACATACCCACTGCTGCAGCCTTCGGGGGTATGTGTATCG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  CTGCAG
- ccatacg
- - - - - - - - - - cagtatg
- - - - - - - - - - - - - - - - - - - - - aggaata
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gccatca