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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtttcatgatagaattcctggtcacgtctttcagtatacatgtacagctaattatcatcttcatggttaataacgacggccttttgtcttgtgatttttgaactctcagCTTGAGGAACTTGAAGAATGTGTTCGAGTAATTGAAGCTTCATGGGATTCTGGCACAGTAGCTGGCAACGACAGCCTCAACATGCACATCTCTCAACCCA

Basic information

species Vitis vinifera
transcript Vv16s0022g02330.t01
intron # 6
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tcatcttcatggttaataacgacggccttttgtcttgtgatttttgaactctcagCTTGAGGAACTTGAAGAATGTGTTCGAGTAATTGAAGCTTCATGGGATTCTGGCACAGTAGCTGGCAACGACAGCCTCAACATGCACATCTCTCAACCCA
             taataac  putative branch site (score: 1)
                                                ctctc  putative PPT
                                       atttttgaa  TA-rich tract