Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtttgttgtaggttaaataacatttatatgttcgatgtattgctataaactggcttttcaatgacattttggtatgttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATTATGACTGTTGGGCCACACTTCAAGGAGGCAAACAACTTCCTGTGGCCAT

Basic information

species Vitis vinifera
transcript Vv11s0052g00290.t01
intron # 6
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv11s0052g00290.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: LOC_Os08g13690.1 (Oryza sativa), 3'ss of exon 6
----gtttg---ttgtagg-ttaaataacatt-tatatgttcgatgtattgcta-taaactggcttttcaatgacattttggtatgttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATTATGACTGTTGGGCCACACTTCAAGGAGGCAAACAACTTCCTGTGGCCAT
    |||||   ||||||| ||  ||    || ||||| | | || ||  |||| | || |   | ||        | |||||     |||  |||  ||||| |||  ||  ||||| |||||||| |||||  |||| ||||| |||||||| || ||||||||||||||||| ||||||||||||||||| |
gtatgtttgctcttgtaggctttcattgtgttgtatatatgccatttacagctaatcaaattcttatttggcctattgttggtcaaccatt--agGGCTTGGGGAAGCATGACATCATCTGCATTGAGGATCTTGTCCACGAGATCATGACTGTCGGTCCACACTTCAAGGAGGCCAACAACTTCCTGTGGCCCT

upper sequence: Vv11s0052g00290.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: LOC_Os04g51630.2 (Oryza sativa), 3'ss of exon 6
gtttgttgtaggttaaataacatttatatgttcgatgtattgctataaactggcttttcaatgacattttggtatgttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATTATGACTGTTGGGCCACACTTCAAGGAGGCAAACAACTTCCTGTGGCCAT
|||||       || |||  || || |   |  | | |     | | || |||    | |  |   | ||||| | || |  |||| |||||| |||  ||  ||||| |||||||| |||||  | |||||||| ||||||||||| ||||| ||||||||||| ||||||||||| |||||||
gtttgccacc--ttgaatctcacttgt---tctgcttttactgtgtcaattggtaccttacag---tcttggtgt-ttgtatcagGGTTTGGGTAAGCATGACATCATCTGCATTGAGGATCTTGTTCATGAGATCATGACTGTTGGCCCACATTTCAAGGAGGCCAACAACTTCCTCTGGCCAT

upper sequence: Vv11s0052g00290.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: GRMZM5G868433_T02 (Zea mays), 3'ss of exon 6
gtttgttgtaggttaaataacatttatatgttcgatgtattgctataaactggcttttca----atgacat------tttggtatgttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATTATGACTGTTGGGCCACACTTCAAGGAGGCAAACAACTTCCTGTGGCCAT
|||||   |           ||  |  ||  |   ||   ||||   |  || |  || |    ||||  |      |||||| |  |||  ||||  |||||||||      |||||||||||||| |||||  | |||||||| |||||||| || ||||||||||||||||| ||||||||||| |||||||
gtttgcaatcttgagctctgcacctggatcctttgtgatctgcttgtatttgacaatttacatgatgatctccaccatttggtgttctat--cagGGCTTGGGCAAGCACAACATCATTTGCATTGAGGATCTTGTTCATGAGATCATGACTGTCGGCCCACACTTCAAGGAGGCGAACAACTTCCTTTGGCCAT

upper sequence: Vv11s0052g00290.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: GRMZM2G094051_T05 (Zea mays), 3'ss of exon 5
gtttgt-----tgtaggt-taaataacatttatatgttcgatgtattgctataaactggcttttcaatg---acattttggtatgttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATTATGACTGTTGGGCCACACTTCAAGGAGGCAAACAACTTCCTGTGGCCAT
||||||     || |  | || ||    ||  | |||||  | |||   |   || |  | |    ||    || ||||||| |  |||  ||||  |||||||||      ||||| |||||||| |||||  | || ||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||
gtttgtaaacttggaactctacatctggttcctgtgttctgtttatatatgacaatttacatgatgatctccaccttttggtgttctat--cagGGCTTGGGCAAGCACAACATCATCTGCATTGAGGATCTTGTTCACGAGATCATGACTGTTGGCCCACACTTCAAGGAGGCCAACAACTTCCTGTGGCCAT

upper sequence: Vv11s0052g00290.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: GRMZM2G344279_T01 (Zea mays), 3'ss of exon 6
gtttgt-----tgtaggt-taaataacatttatatgttcgatgtat---tgctataaactggcttttca-atgac-attttggtatgttattg------cagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATTATGACTGTTGGGCCACACTTCAAGGAGGCAAACAACTTCCTGTGGCCAT
||||||     || |  | || ||    ||  | |||||  | |||   || |   |  || |  || | ||||  || |     | || |||      ||||  |||| ||||     |||||| ||| | || |||||  | || ||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||
gtttgtaaacttggaactgtacatctggttcctgtgttctgtttatatttgtttatatttgacaatttacatgatgatctccaccttttgttgttctatcagGGCTTGGACAAGCAAAAAATCATCTGCGTCGAGGATCTTGTTCACGAGATCATGACTGTTGGCCCACACTTCAAGGAGGCGAACAACTTCCTGTGGCCAT

upper sequence: Vv11s0052g00290.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: GRMZM2G178807_T01 (Zea mays), 3'ss of exon 5
gtttgttgtaggttaaataacatttatatgttcgatgtattgctat--aaactggcttttcaatgacattttggta------tgtt-attgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATTATGACTGTTGGGCCACACTTCAAGGAGGCAAACAACTTCCTGTGGCCAT
|||| |        || || | |    |   |   |  ||    ||   || |  |   | |   | |||||| |       |||| |||  |||   | || |||  |   ||||| ||||| || || ||  | || ||||| ||||| ||||| ||||||||||| ||||| ||||||||||| |||||||
gtttttccatccacaactaccgtgctgaatctgattacatccacattccaatttccgccttatgtatattttgcttaccttctgttcattatagGGCCTTGGGAAGCATAATATCATCTGCATCGAGGACCTTGTTCACGAGATCATGACGGTTGGCCCACACTTCAAAGAGGCCAACAACTTCCTCTGGCCAT

upper sequence: Vv11s0052g00290.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: GRMZM2G100225_T01 (Zea mays), 3'ss of exon 5
----------------------------gtttgttgtaggttaaataa---catttatatgttcgatgtattgctataaactggcttttcaatgacattttg-gtatgttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATTATGACTGTTGGGCCACACTTCAAGGAGGCAAACAACTTCCTGTGGCCAT
                            | ||    ||     | ||    ||  | |  |||| |    | | || |||   |  |||   | || || || |  |||||     ||| | ||| |||      ||||| |||||||| || ||  |||| ||||| ||||| || || || |||||||||||||| ||||||||||| ||||| |
gtttgtcacctgcaacaactaccgtgctgattccgataatccgattaggtccacatttcagttccagccttagataaaaaagagtctttgttttactttctgtgcgtgtta----gGGCCTCGGG-AAGCACAATATCATCTGCATTGAGGACCTTGTCCACGAGATCATGACGGTCGGCCCGCACTTCAAGGAGGCCAACAACTTCCTCTGGCCGT

upper sequence: Vv11s0052g00290.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: GLYMA08G23750.2 (Glycine max), 3'ss of exon 6
gtttgttgtag-gttaaataacatttatatgttcgatgtattgctataaactggcttttcaatgacattttggtatgttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATTATGACTGTTGGGCCACACTTCAAGGAGGCAAACAACTTCCTGTGGCCAT
       |||  ||||| | ||| || | | ||  |   |||   || || |  ||      |      ||| |  |  ||  |||||  ||||||| | ||||||||||| || ||||||||| ||||||||||| || ||||||||||| ||||| |||||||| ||||||||||| |||||||
-------gtattgttaatttacaattctgtatt--acaaatttgaattaattcactacatgcttctgacttgcttgg--atgacagGCGCTGGGCAAATATGGAATCATTTCCACTGAAGATCTGATCCATGAGATCATCACTGTTGGGCCTCACTTTAAGGAGGCTAACAACTTCCTTTGGCCAT

upper sequence: Vv11s0052g00290.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: GLYMA07G02270.1 (Glycine max), 3'ss of exon 6
gtttgttgtaggttaaataacatttatatgttcgatgtattgctataaactggcttttcaatgacattttggtatgttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATTATGACTGTTGGGCCACACTTCAAGGAGGCAAACAACTTCCTGTGGCCAT
      | | | |||  | ||| || |   ||  |   |||   || || | |||      |      ||| |  |  ||  |||||| ||||||||| ||||||||| | || ||||||||| ||||||||||| || |||||||| || ||||| |||||||| ||||||||||| |||||||
-----gtattgtttattttacaattcttcctt--acagattttaattaattcgctacatgcttcttacttgcttgg--atgacagGCTCTGGGCAAGTATGGAATCATATCCACTGAAGATCTGATCCATGAGATCATCACTGTTGGACCTCACTTTAAGGAGGCTAACAACTTCCTTTGGCCAT

upper sequence: Vv11s0052g00290.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: GLYMA15G18170.1 (Glycine max), 3'ss of exon 6
--------------gtttgttgtaggttaaataacatttatatgttcgatgtattgctataaactggctttt--caatgacattttggtatgttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATTATGACTGTTGGGCCACACTTCAAGGAGGCAAACAACTTCCTGTGGCCAT
               | ||| ||    |  | |||| ||  ||      | | || |||| |  | | ||||  |  ||||||      ||   ||  ||| ||||||| |||  ||| ||||||||| |||||||||| ||||||||||| ||||||||||| || |||||||||||||| ||||| || |||||||| |
gtccgtgtggtctattctgtagtcctctgta-aacacttccattgcttgtttgtt-ctattacttagtttttttccctgacat---aacattcaatgccagACTTTGGGGAAGCATGGGATCATTTGCGTTGAAGATCTGATCCATGAGATCATGACTGTTGGACCTCACTTCAAGGAGGCCAACAATTTTCTGTGGCCTT

upper sequence: Vv11s0052g00290.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: GLYMA09G06860.1 (Glycine max), 3'ss of exon 6
----gtttgttgta--ggttaaataacattta-tatgttcgatgtat-----tgctataaactggctttt-caatgacattttggtatgttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATTATGACTGTTGGGCCACACTTCAAGGAGGCAAACAACTTCCTGTGGCCAT
    || || ||||  || ||   | | || | ||| | |  ||  |     | |||| |    | |||| |  ||||||      ||   ||  ||| ||||||| |||  ||| ||||||||| |||||||||| |||||||||||  |||||||||| || || ||||||||||| ||||| || |||||||| |
gtctgtctggtgtaccggctagtcatctttaaatatctccattgcttgtttgttctattactcagttttttcgctgacat---aacattcaatgccagACTTTGGGGAAGCATGGGATCATTTGCGTTGAAGATCTGATCCATGAGATATTGACTGTTGGACCTCATTTCAAGGAGGCCAACAATTTTCTGTGGCCTT

upper sequence: Vv11s0052g00290.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: AT3G13580.2 (Arabidopsis thaliana), 3'ss of exon 6
---------------------------------------------------------------------------------------------------------gtttgttgtaggttaaataacatttatatgtt-cgatgtattgctataaac---tggcttttcaatg-----acattttggtatgttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATTATGACTGTTGGGCCACACTTCAAGGAGGCAAACAACTTCCTGTGGCCAT
                                                                                                         ||| | |  |  ||   |||||  |||   ||   || |||    | ||     || ||| || ||      | ||  |    ||||    ||||   | || |||  ||| ||||| ||| |||| ||||| ||||||||||| ||||| ||||||||||| |||||||| || || |||||  |||||||||
gtgcatatcatcaacctatctccttcatcaagtctggttcagttcctaaagtcaatattattgccgttatccctgtcctagaaaaaatgatgtattatcatcaatgttggattcaatttgtctaacagatatggattgtcatttatcatcaaaactctatgtcttctctatatttacatatcctttgctgttgaatcagGGGCTAGGAAAGCATGGCATCATCTGCGTTGAGGATCTGATCCATGAGATCATGACGGTTGGGCCACATTTCAAGGAAGCCAATAACTTTTTGTGGCCAT

upper sequence: Vv11s0052g00290.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: PP1S2_667V6.2 (Physcomitrella patens), 3'ss of exon 4
------------gtttgttgtaggttaaataacatttatatgttc-gatgtat-tgctataaactggcttttc--aatgacattttggtatgttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATTATGACTGTTGGGCCACACTTCAAGGAGGCAAACAACTTCCTGTGGCCAT
             |   |||      || ||| |||  || |  | || || | | || |  | ||  ||  |   |||| ||| || |   ||  || ||||  | || ||||| || ||||| || ||||| |||||||| ||||||||  | |||||||| || ||||||||||| || ||||||||  | ||| | |
tcgtataaatagctgcattgcgacacaattaaaattagtaggacctgacgtgtatcctttgcagtgatttcacctgatga-attctgttgattttgtgtagGCACTTGGAAAGTTGGGTATCATATGTATTGAGGATCTCATTCATGAGATCTTCACTGTTGGACCTCACTTCAAGGAAGCCAACAACTTTTTATGGTCTT

upper sequence: Vv11s0052g00290.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: EFJ20182 (Selaginella moellendorffii), 3'ss of exon 5
gtttgttgtaggttaaataacatttatatgttcgatgtattgctataaactggcttttcaatgacattttggtatgttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATTATGACTGTTGGGCCACACTTCAAGGAGGCAAACAACTTCCTGTGGCCAT
                 ||| ||   | | | ||||| | | || ||       || |||  |    ||   | |  | |  |||   ||||| |||| ||||||||| || || || ||||||||||| |||||    || || |||||||||||||||||||| || |||||| ||||||| |
----------------gtaagatccttttctacgatg-acttctctag------ttctcatcgtttcttatttgttctttctcagAGCTTGGGGAAGTATGGAATCATCTGTATCGAGGATCTCATCCACGAGATCTACACGGTCGGGCCACACTTCAAGGAGGCGAATAACTTCTTGTGGCCTT

upper sequence: Vv11s0052g00290.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: EFJ23123 (Selaginella moellendorffii), 3'ss of exon 5
gtttgttgtaggttaaataacatttatatgttcgatgtattgctataaactggcttttcaatgacattttggtatgttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATTATGACTGTTGGGCCACACTTCAAGGAGGCAAACAACTTCCTGTGGCCAT
                 ||  ||   | | | ||||| | | |||         || |||  |    ||   | |  | |  |||    |||| |||| ||||||||| || || || ||||||||||| |||||    || ||||||||||||||||||||||| || |||||| ||||||| |
----------------gtacgatccttttctacgatg-acttctag--------ttctcatcgtttcttatttgttctttctcagAGCCTGGGGAAGTATGGAATCATCTGTATCGAGGATCTCATCCACGAGATCTACACGGTTGGGCCACACTTCAAGGAGGCGAATAACTTCTTGTGGCCTT

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|71868080|gb|DT017135.1|DT017135
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|351043525|gb|FQ430999.1|FQ430999
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|30329623|gb|CD012885.1|CD012885
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|110722112|gb|EE098055.1|EE098055
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|351012206|gb|FQ426928.1|FQ426928
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|351013753|gb|FQ433905.1|FQ433905
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|34542829|gb|CF511061.1|CF511061
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|110725716|gb|EE102533.1|EE102533
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|110689658|gb|EE066085.1|EE066085
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|110685837|gb|EE062904.1|EE062904
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|34548592|gb|CF516824.1|CF516824
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|351014510|gb|FQ437512.1|FQ437512
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|77580651|gb|DV219229.1|DV219229
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|110695684|gb|EE073981.1|EE073981
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|110722869|gb|EE099531.1|EE099531
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|26266801|gb|CA817864.1|CA817864
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCACTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|87584219|gb|DY473459.1|DY473459
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|161712382|gb|FC061687.1|FC061687
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|33407532|gb|CF213159.1|CF213159
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|30127744|gb|CB913083.1|CB913083
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|30304879|gb|CB981673.1|CB981673
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|29785690|gb|CB342958.2|CB342958
EST:     AACTTAACAAGCAGAGACCTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|34320197|gb|CF372951.1|CF372951
EST:     AACTTAACAAGCAGAGANCTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|351032161|gb|FQ460418.1|FQ460418
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|71875336|gb|DT024391.1|DT024391
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|34542742|gb|CF510974.1|CF510974
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|110389408|gb|EC954242.1|EC954242
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|161720606|gb|FC070216.1|FC070216
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|33407447|gb|CF213074.1|CF213074
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|110700111|gb|EE077779.1|EE077779
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|351019405|gb|FQ429540.1|FQ429540
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|351015300|gb|FQ445584.1|FQ445584
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|351024712|gb|FQ433127.1|FQ433127
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|351044035|gb|FQ431466.1|FQ431466
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|351030503|gb|FQ436929.1|FQ436929
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|34548001|gb|CF516233.1|CF516233
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGACT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|351015964|gb|FQ431919.1|FQ431919
EST:     AACCTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|71888187|gb|DT037242.1|DT037242
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|110699001|gb|EE077139.1|EE077139
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|110702119|gb|EE080467.1|EE080467
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCTATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|110709244|gb|EE084536.1|EE084536
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|161719021|gb|FC067641.1|FC067641
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|30304952|gb|CB981746.1|CB981746
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|30304884|gb|CB981678.1|CB981678
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|351016367|gb|FQ446227.1|FQ446227
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCCCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|110397494|gb|EC963234.1|EC963234
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|26264883|gb|CA815946.1|CA815946
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCACTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|34548504|gb|CF516736.1|CF516736
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|351029873|gb|FQ427713.1|FQ427713
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|351037576|gb|FQ462559.1|FQ462559
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCTATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATTAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|351021842|gb|FQ437227.1|FQ437227
EST:     AACTTAACAAGCAGAAAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGGCAAGTTTGGAATCATTTGCATTGGAAAA-CTCATCCATGAGA
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGG-CAAGTTTGGAATCATTTGCATTG-AAGATCTCATCCATGAGA
EST: gi|110419750|gb|EC985999.1|EC985999
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|77582255|gb|DV220090.1|DV220090
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|26265679|gb|CA816742.1|CA816742
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|87584426|gb|DY473609.1|DY473609
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|30304947|gb|CB981741.1|CB981741
EST:     AACTTAACAAGCAGAGAACTGCTTTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|351029733|gb|FQ427573.1|FQ427573
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|110700689|gb|EE077563.1|EE077563
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|29784736|gb|CB345836.2|CB345836
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGGGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|349826288|gb|FQ416093.1|FQ416093
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|351042582|gb|FQ431180.1|FQ431180
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACGG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|71884048|gb|DT033103.1|DT033103
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|33407017|gb|CF212644.1|CF212644
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|110429780|gb|EC996285.1|EC996285
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|110691911|gb|EE070557.1|EE070557
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|110703700|gb|EE080774.1|EE080774
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|110413705|gb|EC979507.1|EC979507
EST:     TTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: TTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|161720911|gb|FC070321.1|FC070321
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|110703784|gb|EE080935.1|EE080935
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|22015391|gb|BQ800425.1|BQ800425
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|351028634|gb|FQ446307.1|FQ446307
EST:     AACTTAACAAGCAGAGAACTGCTCTGACCGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|34320356|gb|CF373110.1|CF373110
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|351029952|gb|FQ430694.1|FQ430694
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|34548330|gb|CF516562.1|CF516562
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGACT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|26263687|gb|CA814750.1|CA814750
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|33405893|gb|CF211520.1|CF211520
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|351030952|gb|FQ438988.1|FQ438988
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|349824683|gb|FQ413350.1|FQ413350
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|351014750|gb|FQ437950.1|FQ437950
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|37187339|gb|CF606692.1|CF606692
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|110386718|gb|EC951335.1|EC951335
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|37189894|gb|CF609243.1|CF609243
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|27584547|gb|CB007242.1|CB007242
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|351032451|gb|FQ458816.1|FQ458816
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|110379121|gb|EC944297.1|EC944297
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|110420223|gb|EC986488.1|EC986488
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|71879320|gb|DT028375.1|DT028375
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAGCAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
EST: gi|351048122|gb|FQ442092.1|FQ442092
EST:     AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAG                         GCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT
genomic: AACTTAACAAGCAGAGAACTGCTCTGACTGATAACTCAATCATTGAACAGgtttgttgta ... gttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATT


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttcgatgtattgctataaactggcttttcaatgacattttggtatgttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATTATGACTGTTGGGCCACACTTCAAGGAGGCAAACAACTTCCTGTGGCCAT
                                          tatgttatt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtttgttgtaggttaaataacatttatatgttcgatgtattgctataaactggcttttcaatgacattttggtatgttattgcagGCTTTGGGCAAGTTTGGAATCATTTGCATTGAAGATCTCATCCATGAGATTATGACTGTTGGGCCACACTTCAAGGAGGCAAACAACTTCCTGTGGCCAT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGGAG