1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtaagggtgaatttttcctcccccttgtgcagtatgtatcttctctctactgtcccttgtaattttttctgacgatggctgagtgtattgtaatcctgtctgcagTTATTGGAGATGTGAGGGGAAGAGGGCTGATGCTTGGAGTTGAATTCGTCACTGATCGCAAACTAAAAACTCCTGCAAATGTCGAAATTCTGCATATAAT
species | Vitis vinifera |
transcript | Vv08s0058g00930.t01 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: TGGATCATACTTGAAGGAGCGGCTCCTTTCCCTCAAGGACAAATATGAAA TTATTGGAGATGTGAGGGGAAGAGGGCTGATGCTTGGAGTTGAATTCGTCAEST: gi|46918783|gb|CN548112.1|CN548112
genomic: TGGGTCATACTTGAAGGAGCGGCTCCTTTCCCTCAAGGACAAATATGAAAgtaagggtga ... ctgtctgcagTTATTGGAGATGTGAGGGGAAGAGGGCTGATGCTTGGAGTTGAATTCGTCA
EST: TGGATCATACTTGAAGGAGCGGCTCCTTTCCCTCAAGGACAAATATGAAA TTATTGGAGATGTGAGGGGAAGAGGGCTGATGCTTGGAGTTGAATTCGTCAEST: gi|30125870|gb|CB911209.1|CB911209
genomic: TGGGTCATACTTGAAGGAGCGGCTCCTTTCCCTCAAGGACAAATATGAAAgtaagggtga ... ctgtctgcagTTATTGGAGATGTGAGGGGAAGAGGGCTGATGCTTGGAGTTGAATTCGTCA
EST: TGGGTCATACTTGAAGGAGCGGCTCCTTTCCCTCAAGGACAAATATGAAA TTATTGGAGATGTGAGGGGAAGAGGGCTGATGCTTGGAGTTGAATTCGTCAEST: gi|110362761|gb|EC926313.1|EC926313
genomic: TGGGTCATACTTGAAGGAGCGGCTCCTTTCCCTCAAGGACAAATATGAAAgtaagggtga ... ctgtctgcagTTATTGGAGATGTGAGGGGAAGAGGGCTGATGCTTGGAGTTGAATTCGTCA
EST: TGGATCATACTTGAAGGAGCGGCTCCTTTCCCTCAAGGACAAATATGAAA TTATTGGAGATGTGAGGGGAAGAGGTCTGATGCTTGGAGTTGAATTCGTCAEST: gi|71882027|gb|DT031082.1|DT031082
genomic: TGGGTCATACTTGAAGGAGCGGCTCCTTTCCCTCAAGGACAAATATGAAAgtaagggtga ... ctgtctgcagTTATTGGAGATGTGAGGGGAAGAGGGCTGATGCTTGGAGTTGAATTCGTCA
EST: TGGATCATACTTGAAGGAGCGGCTCCTTTCCCTCAAGGACAAATATGAAA TTATTGGAGATGTGAGGGGAAGAGGGCTGATGCTTGGAGTTGAATTCGTCAEST: gi|352795137|gb|FQ477247.1|FQ477247
genomic: TGGGTCATACTTGAAGGAGCGGCTCCTTTCCCTCAAGGACAAATATGAAAgtaagggtga ... ctgtctgcagTTATTGGAGATGTGAGGGGAAGAGGGCTGATGCTTGGAGTTGAATTCGTCA
EST: TGGGTCATACTTGAAGGAGCGGCTCCTTTCCCTCAAGGACAAATATGAAA TTATTGGAGATGTGAGGGGAAGAGGGCTGATGCTTGGAGTTGAATTCGTCAEST: gi|110390213|gb|EC955113.1|EC955113
genomic: TGGGTCATACTTGAAGGAGCGGCTCCTTTCCCTCAAGGACAAATATGAAAgtaagggtga ... ctgtctgcagTTATTGGAGATGTGAGGGGAAGAGGGCTGATGCTTGGAGTTGAATTCGTCA
EST: TGGATCATACTTGAAGGAGCGGCTCCTTTCCCTCAAGGACAAATATGAAA TTATTGGAGATGTGAGGGGAAGAGGGCTGATGCTTGGAGTTGAATTCGTCAEST: gi|33407479|gb|CF213106.1|CF213106
genomic: TGGGTCATACTTGAAGGAGCGGCTCCTTTCCCTCAAGGACAAATATGAAAgtaagggtga ... ctgtctgcagTTATTGGAGATGTGAGGGGAAGAGGGCTGATGCTTGGAGTTGAATTCGTCA
EST: TGGATCATACTTGAAGGAGCGGCTCCTTTCCCTCAAGGACAAATATGAAA TTATTGGAGATGTGAGGGGAAGAGGGCTGATGCTTGGAGTTGAATTCGTCAEST: gi|71885356|gb|DT034411.1|DT034411
genomic: TGGGTCATACTTGAAGGAGCGGCTCCTTTCCCTCAAGGACAAATATGAAAgtaagggtga ... ctgtctgcagTTATTGGAGATGTGAGGGGAAGAGGGCTGATGCTTGGAGTTGAATTCGTCA
EST: TGGATCATACTTGAAGGAGCGGCTCCTTTCCCTCAAGGACAAATATGAAA TTATTGGAGATGTGAGGGGAAGAGGGCTGATGCTTGGAGTTGAATTCGTCAEST: gi|32458063|gb|CD799237.1|CD799237
genomic: TGGGTCATACTTGAAGGAGCGGCTCCTTTCCCTCAAGGACAAATATGAAAgtaagggtga ... ctgtctgcagTTATTGGAGATGTGAGGGGAAGAGGGCTGATGCTTGGAGTTGAATTCGTCA
EST: TGGATCATACTTGAAGGAGCGGCTCCTTTCCCTCAAGGACAAATATGAAA TTATTGGAGATGTGAGGGGAAGAGGGCTGATGCTTGGAGTTGAATTCGTCAEST: gi|110380642|gb|EC945925.1|EC945925
genomic: TGGGTCATACTTGAAGGAGCGGCTCCTTTCCCTCAAGGACAAATATGAAAgtaagggtga ... ctgtctgcagTTATTGGAGATGTGAGGGGAAGAGGGCTGATGCTTGGAGTTGAATTCGTCA
EST: TGGATCATACTTGAAGGAGCGGCTCCTTTCCCTCAAGGACAAATATGAAA TTATTGGAGATGTGAGGGGAAGAGGGCTGATGCTTGGAGTTGAATTCGTCA
genomic: TGGGTCATACTTGAAGGAGCGGCTCCTTTCCCTCAAGGACAAATATGAAAgtaagggtga ... ctgtctgcagTTATTGGAGATGTGAGGGGAAGAGGGCTGATGCTTGGAGTTGAATTCGTCA
tgtcccttgtaattttttctgacgatggctgagtgtattgtaatcctgtctgcagTTATTGGAGATGTGAGGGGAAGAGGGCTGATGCTTGGAGTTGAATTCGTCACTGATCGCAAACTAAAAACTCCTGCAAATGTCGAAATTCTGCATATAAT
ttctgac putative branch site (score: 2)
tcctgtct putative PPT
ttgtaattttttct TA-rich tract