Skip to another splice site:
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 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaaggacatcaatcgttaggtttttccaagtattaatcatagaacaaagtttccagtgatttggtaattgcttgcatcttctaatgattgaaattcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG

Basic information

species Vitis vinifera
transcript Vv04s0008g07320.t01
intron # 6
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv04s0008g07320.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: LOC_Os02g05630.1 (Oryza sativa), 3'ss of exon 5
gtaaggacatcaatcgttaggtttttccaagtattaatcatagaacaaagtttccagtgatttggtaattgcttgcatcttctaatgattgaaattcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG
           |||     | ||  |   |     ||| ||  |      |||  | |  | |  | ||   | |    |||||| | |||||   | ||| |||| || ||| | ||||| |||||||||||||||||||| |||||||||||||  || |||||||||||||| |||||||||||||| ||| ||
---------gtaatttcatgattcctttga-----aattatctattttgctttgtact--tgtaatgatcattggttctttctaacggttgaacgac-tttgcagGGACGTGGCGTGTTGGTGGTGTTCTTGCTGTTTCTCGAGCATTTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAG

upper sequence: Vv04s0008g07320.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: LOC_Os02g05630.3 (Oryza sativa), 3'ss of exon 5
gtaaggacatcaatcgttaggtttttccaagtattaatcatagaacaaagtttccagtgatttggtaattgcttgcatcttctaatgattgaaattcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG--------
           |||     | ||  |   |     ||| ||  |      |||  | |  | |  | ||   | |    |||||| | |||||   | ||| |||| || ||| | ||||| |||||||||||||||||||| |||||||||||||  || |||||||||||||| |||||||||||||| ||| ||        
---------gtaatttcatgattcctttga-----aattatctattttgctttgtact--tgtaatgatcattggttctttctaacggttgaacgac-tttgcagGGACGTGGCGTGTTGGTGGTGTTCTTGCTGTTTCTCGAGCATTTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAGGTTTGACT

upper sequence: Vv04s0008g07320.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: LOC_Os06g48300.1 (Oryza sativa), 3'ss of exon 5
--------------------gtaaggacatcaatcgttaggtttttccaagtattaatcatagaacaaagtttccagtgatttggtaattgcttgcatcttctaatgattgaaattcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG
                     | |        || | ||  |||  ||   | ||   ||| |||||     |||      |    || ||||   ||  |||  ||   ||||||   ||  |||||| ||| | || || |||||||||||||| ||||| ||||||||||| | |||| ||||||| ||||| |||||||||||||| ||| ||
gtatttcaactcttgatctattcattgtgctgat-gctacatttaccctttttttcgacattgaacaccaagtccttaatctataaaaatgctaaaat--tctgttggcggaaatt---ttgtagGAACATGGCGCGTGGGTGGTGTTCTTGCTGTCTCTCGAGCATTTGGTGACAAACTCCTGAAGCAATATGTGGTTGCTGATCCAGAGATCAAG

upper sequence: Vv04s0008g07320.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: LOC_Os04g56450.2 (Oryza sativa), 3'ss of exon 5
gtaaggacatcaatcgttaggtttttccaagtattaatcatagaacaaagtttccagtgatttggtaattgcttgcatcttctaatgattgaaattcgtttac-agGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG
                        | | ||| | ||  |||      |  ||     ||| | |   || | | |  | | |||||||| | | || |||    |||||| ||| | ||||| ||||| |||||||||||||| || |||||||| | |||||| ||||||||||| ||||  ||||| || || | |
-----------------------gtgctaagcacta--cattatcttattttgtatatgaatggactat-gatcgtgt-tcctaatgatggtattttgttccttagGAACATGGCGTGTTGGTGGTGTGCTTGCTGTTTCTCGCGCTTTTGGTGACAAACTCTTAAAGCAGTATGTAGTTGTGGATCCTGAGATTCGG

upper sequence: Vv04s0008g07320.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: GRMZM5G829894_T02 (Zea mays), 3'ss of exon 3
gtaaggacatcaatcgttaggtttttccaa-gtattaatcatagaacaaagtttccagtgatttggtaattgcttgcatcttctaatgattgaaattcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG
|||  ||   |  |  ||   | | |  || | |   ||| ||    ||  | | |  | | |      ||||||  |     | ||  ||  ||    |||  ||| || ||| | || || |||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||| ||||| || |||||| ||
gtagtgattcctctgattctatctataaaaagaaactatcttatcttaatatgtgccattact-----gttgcttctactgcttgatttttcgaa---atttgtagGGACATGGCGAGTGGGTGGTGTTCTTGCTGTCTCTCGCGCATTTGGTGATAAACTCTTGAAGCAGTATGTTGTCGCTGACCCTGAAATCAAG

upper sequence: Vv04s0008g07320.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: GRMZM2G166035_T02 (Zea mays), 3'ss of exon 5
gtaaggacatcaatcgttaggtttttccaagtattaatcatagaacaaagtttccagtgatttggtaattgcttgcatcttctaatgattgaaattcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG
|||| |    |  ||   |  |||    ||  |  || |||  | |  |||     |||   |     ||  ||| |   | | || |||  || ||   |  ||| || ||||| || || || ||||| ||||| ||||| ||||||||||||| ||||||||||| ||||||||||||||| || |||||| ||
gtaatggttcc--tctgaatttttcaataaaaagaaaccatctatctcagtac---gtgccgttactgttatttgtactgtttgattattcgaaatc---tgtagGGACATGGAGAGTGGGTGGCGTTCTCGCTGTCTCTCGAGCATTTGGTGATAAACTCTTGAAGCCGTATGTTGTTGCTGACCCTGAAATCAAG

upper sequence: Vv04s0008g07320.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: GRMZM2G056572_T02 (Zea mays), 3'ss of exon 5
gtaaggacatcaatcgttaggtttttccaagta-ttaatcatagaacaaagtttccagtgatttggtaattgcttgcatcttctaatgattgaaattcgtt-tacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG
                      | | ||||  | ||  |  |   | ||||||||  |     ||| |  || ||    |||||||||       || ||| || |||||| ||| | ||||| ||||| ||||||||||| ||||| |||||||| | |||||| ||||| ||||| ||||  ||||| || ||||  
---------------------gtatgccaatcacttttttttcttaaaaagtttcttgg----tggaatatgattat-ccttctaatgcccatgctttgttctatagGAACATGGCGCGTTGGTGGTGTACTTGCTGTTTCGCGTGCTTTTGGTGACAAACTCTTAAAGCAATATGTGGTTGTGGATCCGGAGATCCGA

upper sequence: Vv04s0008g07320.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: GRMZM2G056572_T05 (Zea mays), 3'ss of exon 5
gtaaggacatcaatcgttaggtttttccaagta-ttaatcatagaacaaagtttccagtgatttggtaattgcttgcatcttctaatgattgaaattcgtt-tacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG--------
                      | | ||||  | ||  |  |   | ||||||||  |     ||| |  || ||    |||||||||       || ||| || |||||| ||| | ||||| ||||| ||||||||||| ||||| |||||||| | |||||| ||||| ||||| ||||  ||||| || ||||          
---------------------gtatgccaatcacttttttttcttaaaaagtttcttgg----tggaatatgattat-ccttctaatgcccatgctttgttctatagGAACATGGCGCGTTGGTGGTGTACTTGCTGTTTCGCGTGCTTTTGGTGACAAACTCTTAAAGCAATATGTGGTTGTGGATCCGGAGATCCGAGTACGTAA

upper sequence: Vv04s0008g07320.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: GLYMA04G06250.1 (Glycine max), 3'ss of exon 6
gtaaggacatcaat--cgttaggtttttccaagtattaatcatagaacaaagtttccagtgatttggtaattgcttgcatcttctaatgattgaaattcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG
|||| | ||||| |  | |   ||       ||| ||| | ||  ||     | |  |  ||| |  |  ||   |       ||  ||||   | | | | ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||
gtaatgtcatcattaacatatagtcagctttagttttatttatttaat----tctaaaaagatataatgtttatct-------ctgttgataacattacatatacagGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCCTGAAGCAGTATGTTGTTGCTGATCCAGAAATTCAG

upper sequence: Vv04s0008g07320.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: GLYMA14G12220.1 (Glycine max), 3'ss of exon 5
gtaaggacatcaatcgttaggtttttccaagtattaatcatagaacaaagtttccagtgatttggtaattgcttgcatcttctaatgattgaaattcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG
||||||  |||      |  | ||||     ||||     ||  | ||  ||     || ||  || | |   || |   |||||  | |       |||||||||||||||||| ||||| || |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
gtaaggttatcttctagttagcttttt--gttatttgatttattataagattcatcttgttt--gtcacta--tggaaaatctaaacacta-----tgtttacagGAACTTGGAGAGTTGGTGGAGTTCTTGCTGTTTCACGTGCATTTGGTGATAGACTCCTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG

upper sequence: Vv04s0008g07320.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: GLYMA17G33690.2 (Glycine max), 3'ss of exon 6
gtaaggacatca-atcgttaggtttttccaagtattaatcatagaacaaagtttccagtgatttggtaattgcttgcatcttctaatgattgaaattcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG
|||||| ||||  || ||||| ||||   |  | | | | |||||       |||  ||  ||||     |   || |  || |||  | |       |||||||||||||||||| ||||| || |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
gtaaggtcatcttatagttagtttttgtta--tttgatttataga-------ttcttgttgtttgtc---tctatggaaattttaaacacta-----tgtttacagGAACTTGGAGAGTTGGTGGAGTTCTTGCTGTTTCACGTGCATTTGGTGATAGACTCCTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG

upper sequence: Vv04s0008g07320.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: GLYMA06G06310.1 (Glycine max), 3'ss of exon 5
gtaaggacatca---atcgttaggtttttccaagtattaatcatagaacaaagtttccagtgatttggtaattgcttgcatcttctaatgattgaaattcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG
|||| | |||||   ||| |||   | |    ||  ||| |  ||         ||| |   || |    ||       |||  ||| ||||   |   | | ||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||
gtaatgtcatcactcatcattaacatatagtcagctttagttttatttacttaattcaaaaaatatatatataatgcttatca-ctattgataacatcgcatatacagGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCTCGTGCGTTTGGTGATAGACTCCTGAAGCAGTATGTTGTTGCTGATCCAGAAATTCAG

upper sequence: Vv04s0008g07320.t01 (Vitis vinifera), 3'ss of exon 6
lower sequence: AT4G31750.1 (Arabidopsis thaliana), 3'ss of exon 6
gtaaggacatcaatcgttaggtttttccaagtattaatcatagaacaaagtttccagtgatttggtaattgcttgcatcttctaat-gattgaaatt-cgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG
                                |  || |||  |||  |  || |  |  | |  |   |||||  ||  | |  |  |||| ||||    | | |||||| ||||| ||||| || |||||||||||||||||||||||||| |||||  | |||||||||||||||||||||||||| || || |||
-----------------------------gtaagaaaacatttaactgaaatttctct--tcttatttgtgcttatataatttgcttaattggaattatactaaaagGAACATGGAGAGTTGGAGGAGTTCTTGCTGTTTCTCGTGCATTTGGCGATAGGTTGTTGAAGCAGTATGTTGTTGCTGATCCGGAGATACAG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|351037953|gb|FQ465191.1|FQ465191
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351047336|gb|FQ451848.1|FQ451848
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351015288|gb|FQ445572.1|FQ445572
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351049231|gb|FQ449953.1|FQ449953
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351042063|gb|FQ456273.1|FQ456273
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351012818|gb|FQ430381.1|FQ430381
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351032248|gb|FQ460505.1|FQ460505
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|34548353|gb|CF516585.1|CF516585
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351043099|gb|FQ451272.1|FQ451272
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|352789850|gb|FQ478665.1|FQ478665
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351045009|gb|FQ449263.1|FQ449263
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATG
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351013013|gb|FQ433740.1|FQ433740
EST:     TGATGGGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTGGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|110357829|gb|EC921601.1|EC921601
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351029309|gb|FQ436703.1|FQ436703
EST:     GATGAGCGGCAGCGTATTGAGGATTGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: GATGAGCGGCAGCGTATTGAGGAT-GCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|349827540|gb|FQ422408.1|FQ422408
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|349829612|gb|FQ421130.1|FQ421130
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351045561|gb|FQ440746.1|FQ440746
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|349821400|gb|FQ411021.1|FQ411021
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|352794348|gb|FQ481579.1|FQ481579
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351040277|gb|FQ425363.1|FQ425363
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351012750|gb|FQ430313.1|FQ430313
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351054667|gb|FQ456864.1|FQ456864
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|349817052|gb|FQ399799.1|FQ399799
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351052837|gb|FQ456565.1|FQ456565
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351027358|gb|FQ444607.1|FQ444607
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGT
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGT
EST: gi|349830755|gb|FQ417053.1|FQ417053
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351044326|gb|FQ452878.1|FQ452878
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351028368|gb|FQ427264.1|FQ427264
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351055478|gb|FQ442274.1|FQ442274
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|110372684|gb|EC936869.1|EC936869
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|349833265|gb|FQ416643.1|FQ416643
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|110392949|gb|EC957627.1|EC957627
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|349830969|gb|FQ418253.1|FQ418253
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351012611|gb|FQ430175.1|FQ430175
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTTCT-GCTGTTTCTCGTGCATTTGGTGAT
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTT-CTTGCTGTTTCTCGTGCATTTGGTGAT
EST: gi|351056642|gb|FQ443269.1|FQ443269
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351048943|gb|FQ449786.1|FQ449786
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351027668|gb|FQ446835.1|FQ446835
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351026415|gb|FQ428427.1|FQ428427
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCTTTTGGTAGAA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGT-GAT
EST: gi|351054200|gb|FQ450282.1|FQ450282
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351047281|gb|FQ454892.1|FQ454892
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|352790076|gb|FQ479686.1|FQ479686
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351032995|gb|FQ461884.1|FQ461884
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351045607|gb|FQ440792.1|FQ440792
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351055896|gb|FQ452361.1|FQ452361
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351040210|gb|FQ425296.1|FQ425296
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351053821|gb|FQ441587.1|FQ441587
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351041917|gb|FQ456127.1|FQ456127
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|352794319|gb|FQ481550.1|FQ481550
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351022909|gb|FQ428818.1|FQ428818
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|110702341|gb|EE080945.1|EE080945
EST:     TGATGAGCGGCANCGTATTGANGATGCTGGANGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTC
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTC
EST: gi|351044454|gb|FQ442985.1|FQ442985
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|352786293|gb|FQ478904.1|FQ478904
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351048606|gb|FQ448880.1|FQ448880
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|349830841|gb|FQ418149.1|FQ418149
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|352786304|gb|FQ478915.1|FQ478915
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351052370|gb|FQ455542.1|FQ455542
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|110357029|gb|EC920283.1|EC920283
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGTTTTGGGGGTGTTTCTTGCTGTTTCTCGTGCATTTGGTGA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTT-GGGGGTGTT-CTTGCTGTTTCTCGTGCATTTGGTGA
EST: gi|351038034|gb|FQ460776.1|FQ460776
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351014237|gb|FQ434826.1|FQ434826
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351041635|gb|FQ455845.1|FQ455845
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351012059|gb|FQ429865.1|FQ429865
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351038077|gb|FQ460819.1|FQ460819
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|352798552|gb|FQ480577.1|FQ480577
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGACA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
EST: gi|351043128|gb|FQ451301.1|FQ451301
EST:     TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTG                         GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA
genomic: TGATGAGCGGCAGCGTATTGAGGATGCTGGAGGGTTTGTGATGTGGGCTGgtaaggacat ... tcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tttccagtgatttggtaattgcttgcatcttctaatgattgaaattcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG
                             ttctaat  putative branch site (score: 2)
                                            ttcgttt  putative PPT
                                taatgattgaaatt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtaaggacatcaatcgttaggtttttccaagtattaatcatagaacaaagtttccagtgatttggtaattgcttgcatcttctaatgattgaaattcgtttacagGAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCTGAT