1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
...ggtttattggtactttttagaattctacagaactgttgccttctacataccacaaccagctgatgttttcttgttgtaaatacgtgatttgatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
species | Vitis vinifera |
transcript | Vv18s0001g05720.t01 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|110709573|gb|EE085152.1|EE085152
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|351056616|gb|FQ442444.1|FQ442444
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|349828294|gb|FQ416247.1|FQ416247
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCTGATCTGCCAGAGGAAGGAG GTGAGACATCTAAAGCTGATGEST: gi|110397825|gb|EC963748.1|EC963748
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|351025290|gb|FQ434303.1|FQ434303
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTTAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|110364443|gb|EC924186.1|EC924186
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|351054545|gb|FQ452021.1|FQ452021
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCEST: gi|32244981|gb|CD710800.1|CD710800
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTC
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGACCCTCAAGCAGAGEST: gi|34363089|gb|CF404674.1|CF404674
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|30254150|gb|CB971165.1|CB971165
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|351012745|gb|FQ430308.1|FQ430308
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAAAAEST: gi|87586625|gb|DY474825.1|DY474825
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|110405257|gb|EC970796.1|EC970796
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|27755229|gb|CB035984.1|CB035984
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|32245214|gb|CD711033.1|CD711033
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|71890887|gb|DT039942.1|DT039942
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|110392064|gb|EC957212.1|EC957212
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|110395364|gb|EC961026.1|EC961026
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|110364219|gb|EC923597.1|EC923597
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|110701469|gb|EE079073.1|EE079073
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCEST: gi|110424050|gb|EC990403.1|EC990403
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGC
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|110422906|gb|EC989240.1|EC989240
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|110417293|gb|EC983336.1|EC983336
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|110419923|gb|EC986180.1|EC986180
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|27580489|gb|CB003184.1|CB003184
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|351040928|gb|FQ443704.1|FQ443704
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|110370298|gb|EC929339.1|EC929339
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|110411588|gb|EC977309.1|EC977309
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|18459307|gb|BM437585.1|BM437585
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|30300606|gb|CB977400.1|CB977400
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|351026498|gb|FQ428510.1|FQ428510
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|18458453|gb|BM436731.1|BM436731
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAAEST: gi|34549688|gb|CF517920.1|CF517920
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAA
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|351038901|gb|FQ457576.1|FQ457576
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|30253800|gb|CB971085.1|CB971085
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCCCATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|30300673|gb|CB977467.1|CB977467
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCCCATTATGGCCCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGACCCTCAAGCAGAGEST: gi|352798988|gb|FQ480837.1|FQ480837
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTTAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|34362955|gb|CF404540.1|CF404540
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|71873026|gb|DT022081.1|DT022081
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|34544771|gb|CF513003.1|CF513003
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|110716449|gb|EE091439.1|EE091439
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|110368574|gb|EC932559.1|EC932559
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|77587121|gb|DV222691.1|DV222691
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|351036204|gb|FQ464049.1|FQ464049
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTTAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|351022476|gb|FQ446998.1|FQ446998
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|110401144|gb|EC967739.1|EC967739
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|110708397|gb|EE085894.1|EE085894
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|351033022|gb|FQ461911.1|FQ461911
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|30133595|gb|CB918934.1|CB918934
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|110715051|gb|EE092660.1|EE092660
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|45770683|gb|CN006535.1|CN006535
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|110398286|gb|EC964539.1|EC964539
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGEST: gi|110699231|gb|EE076048.1|EE076048
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
EST: TCTTCGGGATAATCTCAC-TTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTNCA-GCAGAGEST: gi|34319532|gb|CF372286.1|CF372286
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCT-CAAGCAGAG
EST: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAG GTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
genomic: TCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGgtaaatgctg ... gatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
cataccacaaccagctgatgttttcttgttgtaaatacgtgatttgatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
ttgtaaata TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ggtttattggtactttttagaattctacagaactgttgccttctacataccacaaccagctgatgttttcttgttgtaaatacgtgatttgatttgacagGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT
- - - - - - - - - - - - - acagaac
- - - - - - - - - - - - - - - - - - tgccttc
- - - - - - - - - - - - - - - - - - - - - - - - - -acaacca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - gctgatg