1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
...tgtgtataatttttgttttcattcttctattttttgtttaacattttgttgagaacattgtcattgttcacttctaactgttgtaccattctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGAACCATACCCACTGGATATGAGGGGAGAATTGGATGATACTGCTGCTTT
species | Vitis vinifera |
transcript | Vv14s0060g00550.t01 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACTCTGGTGAATGGGGEST: gi|110713529|gb|EE089531.1|EE089531
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAAGGTGCGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTATCCTGGTTGAATGGGEST: gi|33409351|gb|CF214978.1|CF214978
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGT-GAATGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|110724668|gb|EE100695.1|EE100695
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGTGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|71859858|gb|DT008913.1|DT008913
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGTGTTTGCTGTATTTCAAG ATCTGGACTTCAGTTTCCTAGAEST: gi|351042212|gb|FQ442679.1|FQ442679
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGA
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGTGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|110424854|gb|EC991228.1|EC991228
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|351036953|gb|FQ459475.1|FQ459475
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGTGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|71857295|gb|DT006350.1|DT006350
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGGGCGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAAEST: gi|30256302|gb|CB972145.1|CB972145
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAA
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAG GEST: gi|30256302|gb|CB972145.1|CB972145
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacag-
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAG GEST: gi|71857604|gb|DT006659.1|DT006659
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacag-
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|71862250|gb|DT011305.1|DT011305
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTEST: gi|33404234|gb|CF209861.1|CF209861
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCT
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGTGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGACGAACCCATTTACCCTGGTGAATGGGGEST: gi|71870674|gb|DT019729.1|DT019729
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: CTTCATAAAGGGTGCGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|352794639|gb|FQ475137.1|FQ475137
genomic: CTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGTGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|71864745|gb|DT013800.1|DT013800
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCEST: gi|110712211|gb|EE089572.1|EE089572
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACC
EST: TCGAGGGAAAATTGGTGACTTCATAAAAGGTGTGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGACGAACC-ATTTACCCCTGGTGAATGGGEST: gi|156735476|gb|EV239597.1|EV239597
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCC-TGGTGAATGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|71858239|gb|DT007294.1|DT007294
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|161716198|gb|FC065858.1|FC065858
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGEST: gi|349832974|gb|FQ416352.1|FQ416352
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGTGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|110730113|gb|EE106821.1|EE106821
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAAAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|110718171|gb|EE094700.1|EE094700
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGTGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|110700143|gb|EE077843.1|EE077843
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCA-AA-GGGTGCGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|71871769|gb|DT020824.1|DT020824
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|161714801|gb|FC063249.1|FC063249
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|161709750|gb|FC058051.1|FC058051
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: ATAAAGGGTGCGTTTGCTGTATTTC-AG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|110730321|gb|EE107269.1|EE107269
genomic: ATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|30301339|gb|CB978133.1|CB978133
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGTGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|71860260|gb|DT009315.1|DT009315
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACTCTGGTGAATEST: gi|71855750|gb|DT004805.1|DT004805
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAAT
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|294966761|gb|GW837780.1|GW837780
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGTGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|26256993|gb|CA808056.1|CA808056
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGTGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|30298235|gb|CB975029.1|CB975029
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TTTGCTGTATTTC-AG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|71865022|gb|DT014077.1|DT014077
genomic: TTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTEST: gi|161711977|gb|FC060844.1|FC060844
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTT
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|161712114|gb|FC061486.1|FC061486
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|156735475|gb|EV239596.1|EV239596
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATGGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|71864850|gb|DT013905.1|DT013905
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGTGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCEST: gi|110710640|gb|EE086952.1|EE086952
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTC
EST: TCGAGGGAAAATTGGTGACTTCATAAAAGGTGTGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|110723142|gb|EE100116.1|EE100116
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGTGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|352786083|gb|FQ481878.1|FQ481878
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGTGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|30253098|gb|CB970649.1|CB970649
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: CGAGGGAAAATTGGTGAC-TGANTAAAGGGTGTGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|71864834|gb|DT013889.1|DT013889
genomic: CGAGGGAAAATTGGTGACTTCA-TAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAG ATCTTGACTTCAGEST: gi|33409430|gb|CF215057.1|CF215057
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAG
EST: TTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCTTGGTGAATGGGGEST: gi|33409787|gb|CF215414.1|CF215414
genomic: TTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGTGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|71863671|gb|DT012726.1|DT012726
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTEST: gi|110724374|gb|EE100156.1|EE100156
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTT
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACC-ATTTNACCCTGGTGAATGGGEST: gi|110712529|gb|EE090258.1|EE090258
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTT-ACCCTGGTGAATGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCCTGGTGAATGGGEST: gi|110698064|gb|EE075650.1|EE075650
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCC-TGGTGAATGGG
EST: GGGTGTGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCCTTTACCCTGGTGAATGGGGEST: gi|37183558|gb|CF602912.1|CF602912
genomic: GGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGTGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|37188175|gb|CF607524.1|CF607524
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGTGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|161712274|gb|FC061897.1|FC061897
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: GGTGACTTCATAAAGGGTGTGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|71865019|gb|DT014074.1|DT014074
genomic: GGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGAEST: gi|110718559|gb|EE095528.1|EE095528
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGA
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGTGTTTGCCGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGAAGAACCCATTTACCCTGGTGAATGGGGEST: gi|161713803|gb|FC063791.1|FC063791
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGTGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGEST: gi|71864321|gb|DT013376.1|DT013376
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGTGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCEST: gi|71863533|gb|DT012588.1|DT012588
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACC
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGTGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGEST: gi|71857095|gb|DT006150.1|DT006150
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGTGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGAEST: gi|352794923|gb|FQ477033.1|FQ477033
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGA
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGTGTTTGCTGTATTTCAGG ATCTTGACTTCAGTTTCCTAGAGATGAACCCGTTTTACC-TGGTGAATGGGEST: gi|71862352|gb|DT011407.1|DT011407
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTT-ACCCTGGTGAATGGG
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGTGTTTGCTGTATTTCAAG ATCTTGACTTCAGTTTCCTAGAGATGAACCEST: gi|71859756|gb|DT008811.1|DT008811
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACC
EST: TCGAGGGAAAATTGGTGACTTCATAAAGGGGGCGTTTGCTGTATTTCAAG ATCTTGACTTCAGT
genomic: TCGAGGGAAAATTGGTGACTTCATAAAGGGTGCGTTTGCTGTATTTCAAGgtatgcaatc ... ctctccacagATCTTGACTTCAGT
ttgttgagaacattgtcattgttcacttctaactgttgtaccattctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGAACCATACCCACTGGATATGAGGGGAGAATTGGATGATACTGCTGCTTT
ttctaac putative branch site (score: 1)
ccattctctcc putative PPT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| tgtgtataatttttgttttcattcttctattttttgtttaacattttgttgagaacattgtcattgttcacttctaactgttgtaccattctctccacagATCTTGACTTCAGTTTCCTAGAGATGAACCCATTTACCCTGGTGAATGGGGAACCATACCCACTGGATATGAGGGGAGAATTGGATGATACTGCTGCTTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - -cattgtc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctgttgt