1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
...agtgaaatcttctcgggggaagctttgaaagtcttttttacaaactactgcatttagacatttatgttaatgatatgacttgtggtttttttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCATATCTGAACACCTATGATGGGAGGACTATCCGCTACCCAGATCCTCTCA
species | Vitis vinifera |
transcript | Vv08s0058g00390.t01 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|110429081|gb|EC995569.1|EC995569
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|110383286|gb|EC947651.1|EC947651
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|110387389|gb|EC952050.1|EC952050
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|110380109|gb|EC945352.1|EC945352
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|110727191|gb|EE103670.1|EE103670
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|161714436|gb|FC064435.1|FC064435
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGTCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|110378441|gb|EC943573.1|EC943573
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|349830589|gb|FQ416887.1|FQ416887
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATGCCAEST: gi|110374748|gb|EC939675.1|EC939675
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: CACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCEST: gi|110364287|gb|EC923785.1|EC923785
genomic: CACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGC-AAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACC
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|37188096|gb|CF607447.1|CF607447
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|110377925|gb|EC943028.1|EC943028
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|110409306|gb|EC974966.1|EC974966
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|161714548|gb|FC063544.1|FC063544
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|161719924|gb|FC065787.1|FC065787
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAGGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|351017691|gb|FQ436044.1|FQ436044
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|37184024|gb|CF603378.1|CF603378
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|352795435|gb|FQ476550.1|FQ476550
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|110688704|gb|EE067560.1|EE067560
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|110701825|gb|EE079837.1|EE079837
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|110727581|gb|EE104508.1|EE104508
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAA-GCATACCAEST: gi|110374495|gb|EC939285.1|EC939285
genomic: ATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|110698624|gb|EE076338.1|EE076338
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|110710513|gb|EE086912.1|EE086912
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|71868661|gb|DT017716.1|DT017716
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|110388553|gb|EC953316.1|EC953316
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|351034241|gb|FQ448038.1|FQ448038
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|110690211|gb|EE067114.1|EE067114
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|352764798|gb|FQ471858.1|FQ471858
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|161717451|gb|FC069225.1|FC069225
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|33405551|gb|CF211178.1|CF211178
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|33408549|gb|CF214176.1|CF214176
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|351018729|gb|FQ425631.1|FQ425631
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|110369231|gb|EC933385.1|EC933385
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|161718530|gb|FC065367.1|FC065367
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|110422691|gb|EC989019.1|EC989019
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|33405639|gb|CF211266.1|CF211266
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|351022061|gb|FQ437848.1|FQ437848
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|349832530|gb|FQ421091.1|FQ421091
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|352782570|gb|FQ476650.1|FQ476650
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|110688682|gb|EE067514.1|EE067514
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCAEST: gi|110686832|gb|EE063712.1|EE063712
genomic: ACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
EST: GGGCCGATTCAGACTCCTCTCAATTAGGGATGAGGAGGCAAAG TTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
genomic: GGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGgtctgtattt ... ttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCA
tactgcatttagacatttatgttaatgatatgacttgtggtttttttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCATATCTGAACACCTATGATGGGAGGACTATCCGCTACCCAGATCCTCTCA
tgttaat putative branch site (score: 3)
tttttttgtct putative PPT
atttatgttaatgata TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| agtgaaatcttctcgggggaagctttgaaagtcttttttacaaactactgcatttagacatttatgttaatgatatgacttgtggtttttttgtctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCATATCTGAACACCTATGATGGGAGGACTATCCGCTACCCAGATCCTCTCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - gggggaa
- - - - - - - - - - - - - - - - - - - - - - ctactgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgacttg