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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gttagtttcaacatctgtcataacatttagtagtattttttttctttttcttactactgatcttgctctttttctcccacaatagAACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAGAGAACCTTTGTTTACATAAAGGATGCTATTGAAGCAGTCTTGTTGATGA

Basic information

species Vitis vinifera
transcript Vv06s0061g01120.t01
intron # 5
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv06s0061g01120.t01 (Vitis vinifera), 3'ss of exon 5
lower sequence: LOC_Os01g73790.1 (Oryza sativa), 3'ss of exon 5
----gttagtt--tcaacatctgtca-taacatttagtagtattttttttctttttcttactactgatcttgctctttttctcccacaatagAACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAGAGAACCTTTGTTTACATAAAGGATGCTATTGAAGCAGTCTTGTTGATGA
    || |     ||    ||||  | ||| ||       | |  || |  |  || ||   |       |          |        |||| || || ||||  ||||| || || ||||| ||||||||||| ||||||||||| ||||||||||| |||||||| |||||||| ||    |||||||
gtatgtcaaccagtccctttctgagaataatatacctccatttcgttatggtcgtttttctcataagatgtatgtcgccaatgaatttgcagAATCTCCTGCGTCGGGAGCCCCTGAAACTTGTTGATGGTGGCCAGTCCCAGAGAACTTTTGTTTACATTAAGGATGCCATTGAAGCTGTTCACTTGATGA

upper sequence: Vv06s0061g01120.t01 (Vitis vinifera), 3'ss of exon 5
lower sequence: GRMZM2G063949_T01 (Zea mays), 3'ss of exon 5
----------------gttagtttcaacatctgtcataacatttagtagtattttttttctttttcttactactgatcttgctctttttctcccacaatagAACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAGAGAACCTTTGTTTACATAAAGGATGCTATTGAAGCAGTCTTGTTGATGA
                 || ||    |    | || |||   ||  | | |   | ||   | |||| |  |        |  |   |  |    ||   ||| || || ||    |||||  | |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| ||||| ||  || ||||||
gtaagtgttcttgtttcttggtgaggatcattatcttaattatttat-gcaccatgttcagtcttctcagaagatgcacggtaccaatggttttgca---gAATCTGCTCCGGAGAGAGCCCTTGAAGCTTGTTGATGGGGGTCAGTCTCAGAGAACCTTTGTCTACATCAAGGATGCTATCGAAGCTGTAGTGCTGATGA

upper sequence: Vv06s0061g01120.t01 (Vitis vinifera), 3'ss of exon 5
lower sequence: GRMZM2G167872_T02 (Zea mays), 3'ss of exon 3
--------gttagtttcaacatctgtcataacatttagtagtattttttttctttttcttactactgatcttgctctttttctcccacaatagAACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAGAGAACCTTTGTTTACATAAAGGATGCTATTGAAGCAGTCTTGTTGATGA
          | ||||    || | |  |   | |  |   |   ||  || |    | ||  | |  |||       |   |        |||| || || || |  |||||  | |||||||| ||||| ||||| || |||||||||||||| ||||| |||||||| || ||||| ||  || ||||||
gtatgtgcacttgtttttttatttattttctgagtatg-gttggcttaattttgcaccatagcattcttctgagaagatgcatggttttgcagAATCTGCTCCGCCGAGAGCCTTTGAAGCTTGTCGATGGGGGCCAGTCTCAGAGAACCTTTGTATACATCAAGGATGCCATCGAAGCTGTTGTGCTGATGA

upper sequence: Vv06s0061g01120.t01 (Vitis vinifera), 3'ss of exon 5
lower sequence: GLYMA12G08930.1 (Glycine max), 3'ss of exon 5
----gttagtttcaacatctgtcataacatttagtagtattttttttct---ttttc----ttactactgatcttgctctttttctcccacaatagAACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAGAGAACCTTTGTTTACATAAAGGATGCTATTGAAGCAGTCTTGTTGATGA
    |||| || |     || |  | |  |||     |  ||||   |    ||||     ||  | |  |  || || |||| ||    |   |||| |||||  |    ||||| |||||||||||||| |||||||| ||||||||||||||||||||||| || |||||||||||||| |||||| ||||||
gtcagttacttacttttgctatgttgaagtttttagatgattttagccagagttttgaaaatttgttcaaaattttctgttttcctttgtctgcagAATCTTCTCAGAGGAGAGCCCCTCAAGCTTGTGGACGGTGGCCAGTCCCAGAGAACCTTTGTTTACATTAAAGATGCTATTGAAGCTGTCTTGCTGATGA

upper sequence: Vv06s0061g01120.t01 (Vitis vinifera), 3'ss of exon 5
lower sequence: GLYMA12G30490.2 (Glycine max), 3'ss of exon 5
-----------gttagtttcaacatctgtcataacatttagtagtattttttttctttttcttactactgatcttgctctttttctcc-------cacaatagAACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAGAGAACCTTTGTTTACATAAAGGATGCTATTGAAGCAGTCTTGTTGATGA
            || | || |   | |||   | | | ||    | ||  |     ||||   | || ||||  |     ||||||||         |  ||||| || || |||   ||||| |||||||||||||||||||||||||||||||| || ||||| || || ||||||||||||||||| ||||| |||||||
gtgagtttacattttgatttagactttgtttaagcttgtatatatgttactcgatatttttgga-taatgattctaaatattttctccattccttttctgtagAATCTCCTCCGTGGAGAGCCCCTCAAGCTTGTGGATGGTGGCCAATCCCAGAGGACTTTTGTGTATATTAAGGATGCTATTGAAGCTGTCTTATTGATGA

upper sequence: Vv06s0061g01120.t01 (Vitis vinifera), 3'ss of exon 5
lower sequence: GLYMA11G19550.1 (Glycine max), 3'ss of exon 5
gttagtttca-acatctgtcataacatttagtagtattttttt--tctttt---------tcttactact-----gatcttgctctttttctcccacaatagAACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAGAGAACCTTTGTTTACATAAAGGATGCTATTGAAGCAGTCTTGTTGATGA
|| |||| |  || | ||  ||  | ||| || | | ||| ||  | ||||         | | |  | |      |  || || |||| ||    |   |||| ||||| ||    ||||| |||||||||||||| |||||||| ||||||||||||||  ||||||| || |||||||||||||| |||||||||||||
gtcagttacttacttttgctattgctttttgttgaagtttgttgatattttagccggagttttgaaaatttgttcaaattttctgttttcctttgtctgcagAATCTTCTCCGAGGAGAGCCCCTCAAGCTTGTGGACGGTGGCCAGTCCCAGAGAACCTTCATTTACATTAAAGATGCTATTGAAGCTGTCTTGTTGATGA

upper sequence: Vv06s0061g01120.t01 (Vitis vinifera), 3'ss of exon 5
lower sequence: GLYMA17G05440.1 (Glycine max), 3'ss of exon 3
-----------gttagtttcaacatctgtcataacattta-gtagtattttttttc--tttttcttactactgatcttgctctttttctcc-------cacaatagAACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAGAGAACCTTTGTTTACATAAAGGATGCTATTGAAGCAGTCTTGTTGATGA
            || | || |   | |||   | | | ||  || | || ||  ||  | ||| | | || ||||  |     |||||| |         |  ||||| || || ||    ||||| |||||||||||||||||||| ||||||||||| || ||||| || || ||||||||||||||||| ||||| |||||||
gtgagtttacattttgatttagactttgtttaagcttgtatatattgttgttagtcaatatttttaaataatgattctaaatattttcttcatttcttttctgtagAATCTCCTCCGCGGAGAGCCCCTCAAGCTTGTGGATGGTGGTCAATCCCAGAGGACTTTTGTGTATATTAAGGATGCTATTGAAGCCGTCTTATTGATGA

upper sequence: Vv06s0061g01120.t01 (Vitis vinifera), 3'ss of exon 5
lower sequence: AT2G27860.1 (Arabidopsis thaliana), 3'ss of exon 5
gttagt-ttcaacatctgtcataacatttagtagtattttttttctttttcttactactgatcttgctctttttctcccacaat--agAACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAGAGAACCTTTGTTTACATAAAGGATGCTATTGAAGCAGTCTTGTTGATGA
|| ||| |||||   |    |||  |   | |  || | | | | | | |   |    | |  |    | | |    | |   |  |||| ||||| |||| |||||| ||||||||||| ||||||||  |||| |||||||| || || ||||| || |||||||||||||| ||| | |||||||
gtaagtgttcaaatccaagtatataacccaatgctagtctgtgtatatatgcaagcttttagttaatgcatctctatctatctttcagAATCTTCTACGTCGTGAGCCTCTCAAGCTTGTAGATGGTGGAGAATCACAGAGAACTTTCGTCTACATCAATGATGCTATTGAAGCTGTCCTTTTGATGA

upper sequence: Vv06s0061g01120.t01 (Vitis vinifera), 3'ss of exon 5
lower sequence: AT1G08200.1 (Arabidopsis thaliana), 3'ss of exon 5
gttagttt-caacatctgtcataacatttagtagtattttttttctttttcttactactgatcttgctctttttctcccacaat---agAACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAGAGAACCTTTGTTTACATAAAGGATGCTATTGAAGCAGTCTTGTTGATGA
|| ||| | ||   |  |||  |  |  |       | |  |  ||    ||||    |  | ||   ||||||       | |   |||| ||||| || |  ||||| ||||||||||||||||||||  |||| |||||||||||  | ||||| || |||||||| ||||| ||| | |||||||
gtaagtatacaggcttagtccaatgacctgagttcttctcatggctgcagcttaacttttttgtttaactttttggtgggtattttcagAATCTTCTGCGACGGGAGCCTCTCAAGCTTGTGGATGGTGGAGAATCACAGAGAACCTTCATCTACATCAAAGATGCTATCGAAGCTGTCCTTTTGATGA

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|110723284|gb|EE100418.1|EE100418
EST:     TTGATGGTCCTAGCGAGGGCGTTCCAGGGGT-CTGGCATGCTTCANTAAT                         AAC-TTCNTCGTCATGAGCC
genomic: TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAATgttagtttca ... cccacaatagAACCTTCTTCGTCATGAGCC
EST: gi|110405386|gb|EC970927.1|EC970927
EST:     TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAAT                         AACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAG
genomic: TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAATgttagtttca ... cccacaatagAACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAG
EST: gi|30298239|gb|CB975033.1|CB975033
EST:     AGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAAT                         AACCTTCTTCGTCATGAGCCGCTCAAGCTTGTGGATGGTGGCCAATCCCAG
genomic: AGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAATgttagtttca ... cccacaatagAACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAG
EST: gi|71884664|gb|DT033719.1|DT033719
EST:     TTGATGGTCCCAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAAT                         AACCTTCTTCGTCATGAGCCGCTCAAGCTTGTGGATGGTGGCCAATCCCAG
genomic: TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAATgttagtttca ... cccacaatagAACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAG
EST: gi|33401793|gb|CF207420.1|CF207420
EST:     TTGATGGTCCCAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAAT                         AACCTTCTTCGTCATGAGCCGCTCAAGCTTGTGGATGGTGGCCAATCCCAG
genomic: TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAATgttagtttca ... cccacaatagAACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAG
EST: gi|71882410|gb|DT031465.1|DT031465
EST:     TTGATGGTCCCAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAAT                         AACCTTCTTCGTCATGAGCCGCTCAAGCTTGTGGATGGTGGCCAATCCCAG
genomic: TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAATgttagtttca ... cccacaatagAACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAG
EST: gi|71858870|gb|DT007925.1|DT007925
EST:     TTGATGGTCCCAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAAT                         AACCTTCTTCGTCATGAGCC
genomic: TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAATgttagtttca ... cccacaatagAACCTTCTTCGTCATGAGCC
EST: gi|110713549|gb|EE089565.1|EE089565
EST:     TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCANTAAT                         AACCTTCTTCGTCATGAGCCACT
genomic: TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAATgttagtttca ... cccacaatagAACCTTCTTCGTCATGAGCCACT
EST: gi|33402259|gb|CF207886.1|CF207886
EST:     TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCGGTAAT                         AACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAG
genomic: TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAATgttagtttca ... cccacaatagAACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAG
EST: gi|71868252|gb|DT017307.1|DT017307
EST:     TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAAT                         AACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAG
genomic: TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAATgttagtttca ... cccacaatagAACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAG
EST: gi|349828491|gb|FQ417233.1|FQ417233
EST:     TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCGTGCTTCAGTAAT                         AACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAG
genomic: TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAATgttagtttca ... cccacaatagAACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAG
EST: gi|71884313|gb|DT033368.1|DT033368
EST:     TTGATGGTCCCAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAAT                         AACCTTCTTCGTCATGAGCCGCTCAAGCTTGTGGATGGTGGCCAATCCCAG
genomic: TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAATgttagtttca ... cccacaatagAACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAG
EST: gi|22007527|gb|BQ792561.1|BQ792561
EST:     TTGAT-GTCCTAGCGA-GGCGTTCCAA-GGTTCTGGCATGCTTCAGTAAT                         AACCTTTTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAG
genomic: TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAATgttagtttca ... cccacaatagAACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAG
EST: gi|33404942|gb|CF210569.1|CF210569
EST:     TTGATGGTCCCAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAAT                         AACCTTCTTCGTCATGAGCCGCTCAAGCTTGTGGATGGTGGCCAATCCCAG
genomic: TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAATgttagtttca ... cccacaatagAACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAG
EST: gi|110397475|gb|EC963215.1|EC963215
EST:     TTGATGGTCCCAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAAT                         AACCTTCTTCGTCATGAGCCGCTCAAGCTTGTGGATGGTGGCCAATCCCAG
genomic: TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAATgttagtttca ... cccacaatagAACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAG
EST: gi|110420047|gb|EC986308.1|EC986308
EST:     TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAAT                         AACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAG
genomic: TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAATgttagtttca ... cccacaatagAACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAG
EST: gi|71890357|gb|DT039412.1|DT039412
EST:     TTGATGGTCCCAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAAT                         AACCTTCTTCGTCATGAGCCGCTCAAGCTTGTGGATGGTGGCCAATCCCAG
genomic: TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAATgttagtttca ... cccacaatagAACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAG
EST: gi|37187419|gb|CF606772.1|CF606772
EST:     TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAAT                         AACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAG
genomic: TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAATgttagtttca ... cccacaatagAACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAG
EST: gi|110396028|gb|EC961702.1|EC961702
EST:     TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAAT                         AACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAG
genomic: TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAATgttagtttca ... cccacaatagAACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAG
EST: gi|110371215|gb|EC935056.1|EC935056
EST:     TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAAT                         AACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAG
genomic: TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAATgttagtttca ... cccacaatagAACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAG
EST: gi|71888796|gb|DT037851.1|DT037851
EST:     TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAAT                         AACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAG
genomic: TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAATgttagtttca ... cccacaatagAACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAG
EST: gi|71885129|gb|DT034184.1|DT034184
EST:     TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAAT                         AACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATC
genomic: TTGATGGTCCTAGCGAGGGCGTTCCAAGGGTTCTGGCATGCTTCAGTAATgttagtttca ... cccacaatagAACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tagtattttttttctttttcttactactgatcttgctctttttctcccacaatagAACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAGAGAACCTTTGTTTACATAAAGGATGCTATTGAAGCAGTCTTGTTGATGA
                        tactgat  putative branch site (score: 2)
       ttttttctttttctta  CT-rich tract
     ttttttttctttttct  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gttagtttcaacatctgtcataacatttagtagtattttttttctttttcttactactgatcttgctctttttctcccacaatagAACCTTCTTCGTCATGAGCCACTCAAGCTTGTGGATGGTGGCCAATCCCAGAGAACCTTTGTTTACATAAAGGATGCTATTGAAGCAGTCTTGTTGATGA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGAAGC